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4933417C20Rik Gene Detail
Summary
  • Symbol
    4933417C20Rik
  • Name
    RIKEN cDNA 4933417C20 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918378
    NCBI Gene: 71128
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:160212943-160214816 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    28 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918378
unclassified gene Chr1:160212943-160214816 (+)
129S1/SvImJ MGP_129S1SvImJ_G0000670
unclassified gene Chr1:165406334-165408207 (+)
A/J MGP_AJ_G0000644
unclassified gene Chr1:158693607-158695480 (+)
AKR/J MGP_AKRJ_G0000633
unclassified gene Chr1:163538083-163539956 (+)
BALB/cJ MGP_BALBcJ_G0000636
unclassified gene Chr1:159241044-159242910 (+)
C3H/HeJ MGP_C3HHeJ_G0000623
unclassified gene Chr1:163725644-163727517 (+)
C57BL/6NJ MGP_C57BL6NJ_G0000753
unclassified gene Chr1:171019068-171020941 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0000495
unclassified gene Chr1:150844174-150845925 (+)
CAST/EiJ MGP_CASTEiJ_G0000616
unclassified gene Chr1:163333255-163335128 (+)
CBA/J MGP_CBAJ_G0000614
unclassified gene Chr1:177088199-177090072 (+)
DBA/2J MGP_DBA2J_G0000618
unclassified gene Chr1:157667382-157669248 (+)
FVB/NJ MGP_FVBNJ_G0000632
unclassified gene Chr1:156076091-156077964 (+)
LP/J MGP_LPJ_G0000676
unclassified gene Chr1:166517838-166519711 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0000624
unclassified gene Chr1:184581523-184583396 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0000745
unclassified gene Chr1:163357306-163359179 (+)
PWK/PhJ MGP_PWKPhJ_G0000568
unclassified gene Chr1:156811008-156812878 (+)
SPRET/EiJ MGP_SPRETEiJ_G0000543
unclassified gene Chr1:162205977-162207860 (+)
WSB/EiJ MGP_WSBEiJ_G0000620
unclassified gene Chr1:163531648-163533521 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103006 Ensembl Gene Model | MGI Sequence Detail 1874 C57BL/6J ±  kb
transcript AK016840 GenBank | EMBL | DDBJ | MGI Sequence Detail 1123 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
Other
Accession IDs
less
MGI:2138107
References
more
  • Summaries
    All 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory