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Rbbp5 Gene Detail
Summary
  • Symbol
    Rbbp5
  • Name
    retinoblastoma binding protein 5
  • Synonyms
    4933411J24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918367
    NCBI Gene: 213464
  • Gene Overview
    MyGene.info: RBBP5
Location & Maps
more
  • Sequence Map
    Chr1:132477365-132505659 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      28295 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 57.24 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    RBBP5, RB binding protein 5, histone lysine methyltransferase complex subunit
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RBBP5, RB binding protein 5, histone lysine methyltransferase complex subunit
    Orthology source: HomoloGene, HGNC
  • Synonyms
    RBQ3, SWD1
  • Links
    NCBI Gene ID: 5929
    neXtProt AC: NX_Q15291

  • Chr Location
    1q32.1; chr1:205086142-205122022 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    60
  • Chemically induced (other)
    2
  • Gene trapped
    57
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Rbbp5
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000049391 VEGA Gene Model | MGI Sequence Detail 28295 C57BL/6J ±  kb
transcript OTTMUST00000125904 VEGA | MGI Sequence Detail 2856 Not Applicable  
polypeptide OTTMUSP00000068135 VEGA | MGI Sequence Detail 538 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    195 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 3
References
more
  • Summaries
    All 37
    Developmental Gene Expression 3
    Gene Ontology 12
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:204007 Ravnskjaer K, et al., Glucagon regulates gluconeogenesis through KAT2B- and WDR5-mediated epigenetic effects. J Clin Invest. 2013 Oct 1;123(10):4318-28

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory