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Cep170 Gene Detail
Summary
  • Symbol
    Cep170
  • Name
    centrosomal protein 170
  • Synonyms
    4933426L22Rik, A330004A13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918348
    NCBI Gene: 545389
  • Gene Overview
    MyGene.info: CEP170
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:176733653-176814067 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 82.60 cM, cytoband H3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    355 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918348
protein coding gene Chr1:176729072-176814177 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016845
protein coding gene Chr1:182879771-182967499 (-)
A/J MGP_AJ_G0016824
protein coding gene Chr1:175505772-175586679 (-)
AKR/J MGP_AKRJ_G0016790
protein coding gene Chr1:180756268-180839819 (-)
BALB/cJ MGP_BALBcJ_G0016781
protein coding gene Chr1:176033976-176114674 (-)
C3H/HeJ MGP_C3HHeJ_G0016607
protein coding gene Chr1:181365254-181446952 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017246
protein coding gene Chr1:188915489-189001169 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014952
protein coding gene Chr1:166794692-166878880 (-)
CAST/EiJ MGP_CASTEiJ_G0016188
protein coding gene Chr1:180724204-180818966 (-)
CBA/J MGP_CBAJ_G0016580
protein coding gene Chr1:195794399-195888219 (-)
DBA/2J MGP_DBA2J_G0016686
protein coding gene Chr1:174367808-174448832 (-)
FVB/NJ MGP_FVBNJ_G0016683
protein coding gene Chr1:172456251-172539413 (-)
LP/J MGP_LPJ_G0016761
protein coding gene Chr1:184070888-184154359 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016714
protein coding gene Chr1:203018845-203113964 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017282
protein coding gene Chr1:180494881-180575092 (-)
PWK/PhJ MGP_PWKPhJ_G0015975
protein coding gene Chr1:173445705-173527123 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015752
protein coding gene Chr1:179586731-179679418 (-)
WSB/EiJ MGP_WSBEiJ_G0016250
protein coding gene Chr1:180717294-180806665 (-)



Homology
more
  • Human Ortholog
    CEP170, centrosomal protein 170
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CEP170, centrosomal protein 170
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FAM68A, KAB, KIAA0470
  • Links
    NCBI Gene ID: 9859
    neXtProt AC: NX_Q5SW79
    UniProt: Q5SW79

  • Chr Location
    1q43; chr1:243124428-243255936 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 22844
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CEP170
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057335 Ensembl Gene Model | MGI Sequence Detail 80415 C57BL/6J ±  kb
transcript ENSMUST00000194727 Ensembl | MGI Sequence Detail 6784 Not Applicable  
polypeptide ENSMUSP00000141793 Ensembl | MGI Sequence Detail 1588 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 76
    cDNA 76

    Microarray probesets 4
Other
Accession IDs
less
MGI:2138171, MGI:2444094
References
more
  • Summaries
    All 36
    Gene Ontology 5
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265606 Copeland SJ, et al., Actin-dependent regulation of cilia length by the inverted formin FHDC1. Mol Biol Cell. 2018 Jul 1;29(13):1611-1627

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory