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Trp53rka Gene Detail
Summary
  • Symbol
    Trp53rka
  • Name
    transformation related protein 53 regulating kinase A
  • Synonyms
    2810408M09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918294
    NCBI Gene: 381406
  • Gene Overview
    MyGene.info: TP53RK
Location & Maps
more
  • Sequence Map
    Chr2:165490110-165493324 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3215 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    TP53RK, TP53 regulating kinase
  • Vertebrate Orthologs
    11
  • Human Ortholog
    TP53RK, TP53 regulating kinase
    Orthology source: HGNC, HomoloGene
  • Synonyms
    BUD32, C20orf64, dJ101A2, Nori-2, Nori-2p, PRPK
  • Links
    NCBI Gene ID: 112858
    neXtProt AC: NX_Q96S44

  • Chr Location
    20q13.2; chr20:46684365-46689637 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    3
  • Targeted
    3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000001115 VEGA Gene Model | MGI Sequence Detail 3215 C57BL/6J ±  kb
transcript OTTMUST00000002186 VEGA | MGI Sequence Detail 1880 Not Applicable  
polypeptide OTTMUSP00000001066 VEGA | MGI Sequence Detail 244 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    29 from dbSNP Build 142
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:141291 Tamplin OJ, et al., Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives. BMC Genomics. 2008;9(1):511

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory