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Spats1 Gene Detail
Summary
  • Symbol
    Spats1
  • Name
    spermatogenesis associated, serine-rich 1
  • Synonyms
    1700011H05Rik, 4933400B06Rik, Srsp1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918270
    NCBI Gene: 71020
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:45448937-45474938 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 22.44 cM, cytoband C
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    167 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918270
protein coding gene Chr17:45445877-45475194 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023787
protein coding gene Chr17:46455625-46483627 (-)
A/J MGP_AJ_G0023745
protein coding gene Chr17:45348794-45374686 (-)
AKR/J MGP_AKRJ_G0023716
protein coding gene Chr17:45652573-45685032 (-)
BALB/cJ MGP_BALBcJ_G0023749
protein coding gene Chr17:45238439-45265247 (-)
C3H/HeJ MGP_C3HHeJ_G0023513
protein coding gene Chr17:46364842-46393872 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024192
protein coding gene Chr17:48457065-48496533 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021642
protein coding gene Chr17:42146118-42173186 (-)
CAST/EiJ MGP_CASTEiJ_G0022994
protein coding gene Chr17:46460794-46490439 (-)
CBA/J MGP_CBAJ_G0023489
protein coding gene Chr17:50181038-50216075 (-)
DBA/2J MGP_DBA2J_G0023615
protein coding gene Chr17:44140538-44166551 (-)
FVB/NJ MGP_FVBNJ_G0023582
protein coding gene Chr17:43715962-43745162 (-)
LP/J MGP_LPJ_G0023696
protein coding gene Chr17:47105189-47133358 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023611
protein coding gene Chr17:49746725-49778198 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024237
protein coding gene Chr17:46012128-46039352 (-)
PWK/PhJ MGP_PWKPhJ_G0022739
protein coding gene Chr17:43443233-43470921 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022554
protein coding gene Chr17:42880915-42911080 (-)
WSB/EiJ MGP_WSBEiJ_G0023059
protein coding gene Chr17:46538003-46564408 (-)



Homology
more
  • Human Ortholog
    SPATS1, spermatogenesis associated serine rich 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SPATS1, spermatogenesis associated serine rich 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DDIP, SPATA8, SRSP1
  • Links
    NCBI Gene ID: 221409
    neXtProt AC: NX_Q496A3
    UniProt: Q496A3

  • Chr Location
    6p21.1; chr6:44342660-44377167 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000023935 Ensembl Gene Model | MGI Sequence Detail 26002 C57BL/6J ±  kb
transcript ENSMUST00000233553 Ensembl | MGI Sequence Detail 997 Not Applicable  
polypeptide ENSMUSP00000156716 Ensembl | MGI Sequence Detail 327 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000015500 spermatogenesis-associated serine-rich protein 1
  • InterPro Domains
    IPR029165 Spermatogenesis-associated serine-rich protein 1
Molecular
Reagents
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  • All nucleic 11
    cDNA 11

    Microarray probesets 4
Other
Accession IDs
less
MGI:1916539
References
more
  • Summaries
    All 28
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory