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Ccdc83 Gene Detail
Summary
  • Symbol
    Ccdc83
  • Name
    coiled-coil domain containing 83
  • Synonyms
    4930549K11Rik, 4930554C01Rik, 4932423M01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918255
    NCBI Gene: 75338
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:90223873-90265777 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 50.48 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    397 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918255
protein coding gene Chr7:90223500-90265777 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032504
protein coding gene Chr7:92637555-92679121 (-)
A/J MGP_AJ_G0032478
protein coding gene Chr7:90412316-90452035 (-)
AKR/J MGP_AKRJ_G0032414
protein coding gene Chr7:92526393-92566884 (-)
BALB/cJ MGP_BALBcJ_G0032489
protein coding gene Chr7:90057496-90102422 (-)
C3H/HeJ MGP_C3HHeJ_G0032204
protein coding gene Chr7:92913972-92955850 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032987
protein coding gene Chr7:96255448-96296085 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029982
protein coding gene Chr7:93308205-93347383 (-)
CAST/EiJ MGP_CASTEiJ_G0031531
protein coding gene Chr7:84349293-84392750 (-)
CBA/J MGP_CBAJ_G0032171
protein coding gene Chr7:99461472-99507397 (-)
DBA/2J MGP_DBA2J_G0032323
protein coding gene Chr7:88838179-88881236 (-)
FVB/NJ MGP_FVBNJ_G0032279
protein coding gene Chr7:88711760-88751474 (-)
LP/J MGP_LPJ_G0032412
protein coding gene Chr7:93896939-93944125 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032313
protein coding gene Chr7:100469818-100514663 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033009
protein coding gene Chr7:91800650-91842019 (-)
PWK/PhJ MGP_PWKPhJ_G0031249
protein coding gene Chr7:81883116-81925595 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031092
protein coding gene Chr7:79137356-79180177 (-)
WSB/EiJ MGP_WSBEiJ_G0031648
protein coding gene Chr7:92475056-92516636 (-)



Homology
more
  • Human Ortholog
    CCDC83, coiled-coil domain containing 83
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC83, coiled-coil domain containing 83
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CT148, HSD9, KP-CoT-23
  • Links
    NCBI Gene ID: 220047
    neXtProt AC: NX_Q8IWF9
    UniProt: Q8IWF9

  • Chr Location
    11q14.1-q14.2; chr11:85855066-85920021 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 32709
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CCDC83
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    28 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030617 Ensembl Gene Model | MGI Sequence Detail 41905 C57BL/6J ±  kb
transcript ENSMUST00000107221 Ensembl | MGI Sequence Detail 1390 Not Applicable  
polypeptide ENSMUSP00000102839 Ensembl | MGI Sequence Detail 408 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR026702 Coiled-coil domain-containing protein 83
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 5
Other
Accession IDs
less
MGI:1922584, MGI:1922588
References
more
  • Summaries
    All 45
    Phenotypes 28
  • Earliest
    J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory