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Ccdc83 Gene Detail
Summary
  • Symbol
    Ccdc83
  • Name
    coiled-coil domain containing 83
  • Synonyms
    4930549K11Rik, 4930554C01Rik, 4932423M01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918255
    NCBI Gene: 75338
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:90223873-90265777 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 50.48 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    397 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918255
protein coding gene Chr7:90223500-90265777 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032504
protein coding gene Chr7:92637555-92679121 (-)
A/J MGP_AJ_G0032478
protein coding gene Chr7:90412316-90452035 (-)
AKR/J MGP_AKRJ_G0032414
protein coding gene Chr7:92526393-92566884 (-)
BALB/cJ MGP_BALBcJ_G0032489
protein coding gene Chr7:90057496-90102422 (-)
C3H/HeJ MGP_C3HHeJ_G0032204
protein coding gene Chr7:92913972-92955850 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032987
protein coding gene Chr7:96255448-96296085 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029982
protein coding gene Chr7:93308205-93347383 (-)
CAST/EiJ MGP_CASTEiJ_G0031531
protein coding gene Chr7:84349293-84392750 (-)
CBA/J MGP_CBAJ_G0032171
protein coding gene Chr7:99461472-99507397 (-)
DBA/2J MGP_DBA2J_G0032323
protein coding gene Chr7:88838179-88881236 (-)
FVB/NJ MGP_FVBNJ_G0032279
protein coding gene Chr7:88711760-88751474 (-)
LP/J MGP_LPJ_G0032412
protein coding gene Chr7:93896939-93944125 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032313
protein coding gene Chr7:100469818-100514663 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033009
protein coding gene Chr7:91800650-91842019 (-)
PWK/PhJ MGP_PWKPhJ_G0031249
protein coding gene Chr7:81883116-81925595 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031092
protein coding gene Chr7:79137356-79180177 (-)
WSB/EiJ MGP_WSBEiJ_G0031648
protein coding gene Chr7:92475056-92516636 (-)



Homology
more
  • Human Ortholog
    CCDC83, coiled-coil domain containing 83
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC83, coiled-coil domain containing 83
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CT148, HSD9, KP-CoT-23
  • Links
    NCBI Gene ID: 220047
    neXtProt AC: NX_Q8IWF9
    UniProt: Q8IWF9

  • Chr Location
    11q14.1-q14.2; chr11:85855066-85920021 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 32709
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CCDC83
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    28 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030617 Ensembl Gene Model | MGI Sequence Detail 41905 C57BL/6J ±  kb
transcript ENSMUST00000107221 Ensembl | MGI Sequence Detail 1390 Not Applicable  
polypeptide ENSMUSP00000102839 Ensembl | MGI Sequence Detail 408 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 5
Other
Accession IDs
less
MGI:1922584, MGI:1922588
References
more
  • Summaries
    All 46
    Phenotypes 28
  • Earliest
    J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory