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Fancd2os Gene Detail
Summary
  • Symbol
    Fancd2os
  • Name
    Fancd2 opposite strand
  • Synonyms
    4931417G12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918229
    NCBI Gene: 70979
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:113596761-113600715 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 52.80 cM, cytoband E3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    55 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918229
protein coding gene Chr6:113596761-113601085 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031131
protein coding gene Chr6:116133288-116137242 (-)
A/J MGP_AJ_G0031100
protein coding gene Chr6:111675073-111679027 (-)
AKR/J MGP_AKRJ_G0031031
protein coding gene Chr6:114675674-114679628 (-)
BALB/cJ MGP_BALBcJ_G0031111
protein coding gene Chr6:111620667-111624621 (-)
C3H/HeJ MGP_C3HHeJ_G0030597
protein coding gene Chr6:69621161-69625115 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031570
protein coding gene Chr6:119126948-119130902 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028734
protein coding gene Chr6:108700658-108704764 (-)
CAST/EiJ MGP_CASTEiJ_G0030218
protein coding gene Chr6:115130881-115134867 (-)
CBA/J MGP_CBAJ_G0030797
protein coding gene Chr6:123836370-123840324 (-)
DBA/2J MGP_DBA2J_G0030950
protein coding gene Chr6:110757982-110761936 (-)
FVB/NJ MGP_FVBNJ_G0030904
protein coding gene Chr6:109759312-109763266 (-)
LP/J MGP_LPJ_G0031030
protein coding gene Chr6:116160701-116164655 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030938
protein coding gene Chr6:128089783-128093737 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031597
protein coding gene Chr6:114692461-114696415 (-)
PWK/PhJ MGP_PWKPhJ_G0029934
protein coding gene Chr6:109710682-109714648 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029762
protein coding gene Chr6:113499455-113503410 (-)
WSB/EiJ MGP_WSBEiJ_G0030302
protein coding gene Chr6:115066009-115069956 (-)



Homology
more
  • Human Ortholog
    FANCD2OS, FANCD2 opposite strand
  • Vertebrate Orthologs
    9
  • Human Ortholog
    FANCD2OS, FANCD2 opposite strand
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C3orf24
  • Links
    NCBI Gene ID: 115795
    neXtProt AC: NX_Q96PS1
    UniProt: Q96PS1

  • Chr Location
    3p25.3; chr3:10081320-10108603 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000033963 Ensembl Gene Model | MGI Sequence Detail 3955 C57BL/6J ±  kb
transcript ENSMUST00000125139 Ensembl | MGI Sequence Detail 1150 Not Applicable  
polypeptide ENSMUSP00000121804 Ensembl | MGI Sequence Detail 178 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027966 FANCD2 opposite strand protein
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Phenotypes 8
  • Earliest
    J:56766 Takahashi Y, et al., Relaxed negative selection in germinal centers and impaired affinity maturation in bcl-xL transgenic mice. J Exp Med. 1999 Aug 2;190(3):399-410
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory