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Cabs1 Gene Detail
Summary
  • Symbol
    Cabs1
  • Name
    calcium binding protein, spermatid specific 1
  • Synonyms
    4931407G18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918227
    NCBI Gene: 70977
Location & Maps
more
  • Sequence Map
    Chr5:87979439-87981544 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      2106 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 43.56 cM, cytoband E2
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CABS1, calcium binding protein, spermatid associated 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CABS1, calcium binding protein, spermatid associated 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C4orf35, CLPH, NYD-SP26
  • Links
    NCBI Gene ID: 85438
    neXtProt AC: NX_Q96KC9

  • Chr Location
    4q13.3; chr4:70334954-70337116 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Cabs1
  • Incidental Mutations
    APF , CvDC
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022058 VEGA Gene Model | MGI Sequence Detail 2106 C57BL/6J ±  kb
transcript OTTMUST00000052375 VEGA | MGI Sequence Detail 1505 Not Applicable  
polypeptide OTTMUSP00000024827 VEGA | MGI Sequence Detail 391 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    16 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000005600 calcium-binding and spermatid-specific protein 1
  • InterPro Domains
    IPR026118 Calcium-binding and spermatid-specific protein 1
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
Other
Accession IDs
less
MGI:2140871
References
more
  • Summaries
    All 24
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:149857 Kawashima A, et al., CABS1 is a novel calcium-binding protein specifically expressed in elongate spermatids of mice. Biol Reprod. 2009 Jun;80(6):1293-304

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory