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Ccdc178 Gene Detail
Summary
  • Symbol
    Ccdc178
  • Name
    coiled coil domain containing 178
  • Synonyms
    4921528I01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918200
    NCBI Gene: 70950
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:21810897-22171396 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 11.96 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1783 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918200
protein coding gene Chr18:21810893-22171442 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024189
protein coding gene Chr18:19453622-19845950 (-)
A/J MGP_AJ_G0024154
protein coding gene Chr18:18937448-19299600 (-)
AKR/J MGP_AKRJ_G0024123
protein coding gene Chr18:19518459-19891034 (-)
BALB/cJ MGP_BALBcJ_G0024154
protein coding gene Chr18:19004110-19369105 (-)
C3H/HeJ MGP_C3HHeJ_G0023922
protein coding gene Chr18:19462441-19828633 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024596
protein coding gene Chr18:20371895-20753859 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022038
protein coding gene Chr18:18912606-19262562 (-)
CAST/EiJ MGP_CASTEiJ_G0023395
protein coding gene Chr18:19238288-19619824 (-)
CBA/J MGP_CBAJ_G0023890
protein coding gene Chr18:20913099-21302850 (-)
DBA/2J MGP_DBA2J_G0024022
protein coding gene Chr18:18637215-18994000 (-)
FVB/NJ MGP_FVBNJ_G0023988
protein coding gene Chr18:18416269-18769900 (-)
LP/J MGP_LPJ_G0024103
protein coding gene Chr18:19620772-20006974 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024016
protein coding gene Chr18:21775181-22216597 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024644
protein coding gene Chr18:19282743-19658378 (-)
PWK/PhJ MGP_PWKPhJ_G0023140
protein coding gene Chr18:18740444-19120415 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022949
protein coding gene Chr18:19456322-19827424 (-)
WSB/EiJ MGP_WSBEiJ_G0023460
protein coding gene Chr18:19198668-19580286 (-)



Homology
more
  • Human Ortholog
    CCDC178, coiled-coil domain containing 178
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC178, coiled-coil domain containing 178
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C18orf34
  • Links
    NCBI Gene ID: 374864
    neXtProt AC: NX_Q5BJE1
    UniProt: Q5BJE1

  • Chr Location
    18q12.1; chr18:32937402-33441040 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
Male mice homozygous for a mutation are viable and show normal fertility.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 70950 NCBI Gene Model | MGI Sequence Detail 360500 C57BL/6J ±  kb
transcript NM_027616 RefSeq | MGI Sequence Detail 3335 C57BL/6  
polypeptide Q8CDV0 UniProt | EBI | MGI Sequence Detail 866 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR038826 Coiled-coil domain-containing protein 178
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:234235 Miyata H, et al., Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice. Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7704-10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory