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Trim45 Gene Detail
Summary
  • Symbol
    Trim45
  • Name
    tripartite motif-containing 45
  • Synonyms
    4921530N01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918187
    NCBI Gene: 229644
  • Gene Overview
    MyGene.info: TRIM45
Location & Maps
more
  • Sequence Map
    Chr3:100922202-100936920 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      14719 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 43.85 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TRIM45, tripartite motif containing 45
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TRIM45, tripartite motif containing 45
    Orthology source: HGNC, HomoloGene
  • Synonyms
    RNF99
  • Links
    NCBI Gene ID: 80263
    neXtProt AC: NX_Q9H8W5

  • Chr Location
    1p13.1; chr1:117111055-117121789 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    5
  • Genomic Mutations
    2 involving Trim45
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007079 VEGA Gene Model | MGI Sequence Detail 14719 C57BL/6J ±  kb
transcript OTTMUST00000016377 VEGA | MGI Sequence Detail 2274 Not Applicable  
polypeptide OTTMUSP00000007492 VEGA | MGI Sequence Detail 757 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    76 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 21
    cDNA 21

    Microarray probesets 2
References
more
  • Summaries
    All 29
    Developmental Gene Expression 3
    Gene Ontology 4
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:188142 Bassett JH, et al., Rapid-throughput skeletal phenotyping of 100 knockout mice identifies 9 new genes that determine bone strength. PLoS Genet. 2012 Aug;8(8):e1002858

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory