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Speer4f1 Gene Detail
Summary
  • Symbol
    Speer4f1
  • Name
    spermatogenesis associated glutamate (E)-rich protein 4F1
  • Synonyms
    4922502J04Rik, Speer4f, SPEER-4F
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918185
    NCBI Gene: 70935
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:17476122-17480936 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 7.98 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    124 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918185
protein coding gene Chr5:17476098-17480936 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029302
protein coding gene Chr5:14854004-14858589 (+)
A/J MGP_AJ_G0029269
protein coding gene Chr5:14412936-14418306 (+)
AKR/J MGP_AKRJ_G0029217
protein coding gene Chr5:14919790-15029967 (+)
BALB/cJ MGP_BALBcJ_G0029281
protein coding gene Chr5:14835111-14837643 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0029733
protein coding gene Chr5:16151332-16157531 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0028965
protein coding gene Chr5:16154075-16162049 (+)
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 70935 NCBI Gene Model | MGI Sequence Detail 4815 C57BL/6J ±  kb
transcript NM_027609 RefSeq | MGI Sequence Detail 1232 C57BL/6  
polypeptide NP_081885 RefSeq | MGI Sequence Detail 258 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR006907 Domain of unknown function DUF622
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 11
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:119563 Alt B, et al., Arteries define the position of the thyroid gland during its developmental relocalisation. Development. 2006 Oct;133(19):3797-804

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory