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Fam71d Gene Detail
Summary
  • Symbol
    Fam71d
  • Name
    family with sequence similarity 71, member D
  • Synonyms
    4921509E07Rik, 4930516C23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918147
    NCBI Gene: 70897
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:78738309-78781290 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 35.51 cM, cytoband D2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    143 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918147
protein coding gene Chr12:78738257-78781293 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019871
protein coding gene Chr12:78953620-78999141 (+)
A/J MGP_AJ_G0019829
protein coding gene Chr12:76122679-76164352 (+)
AKR/J MGP_AKRJ_G0019804
protein coding gene Chr12:78186600-78228126 (+)
BALB/cJ MGP_BALBcJ_G0019808
protein coding gene Chr12:76370877-76414802 (+)
C3H/HeJ MGP_C3HHeJ_G0019614
protein coding gene Chr12:78647401-78691456 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020260
protein coding gene Chr12:81289150-81337278 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017878
protein coding gene Chr12:73149530-73189269 (+)
CAST/EiJ MGP_CASTEiJ_G0019164
protein coding gene Chr12:73477877-73521997 (+)
CBA/J MGP_CBAJ_G0019584
protein coding gene Chr12:84464382-84506504 (+)
DBA/2J MGP_DBA2J_G0019700
protein coding gene Chr12:75749309-75787275 (+)
FVB/NJ MGP_FVBNJ_G0019686
protein coding gene Chr12:74560856-74600879 (+)
LP/J MGP_LPJ_G0019772
protein coding gene Chr12:78885291-78928254 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019725
protein coding gene Chr12:87503861-87550032 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020296
protein coding gene Chr12:77694277-77739845 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0018724
protein coding gene Chr12:72200815-72244086 (+)
WSB/EiJ MGP_WSBEiJ_G0019217
protein coding gene Chr12:78299599-78343498 (+)



Homology
more
  • Human Ortholog
    FAM71D, family with sequence similarity 71 member D
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM71D, family with sequence similarity 71 member D
  • Synonyms
    C14orf54
  • Links
    NCBI Gene ID: 161142
    neXtProt AC: NX_Q8N9W8
    UniProt: Q8N9W8

  • Chr Location
    14q23.3; chr14:67188365-67228550 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000056987 Ensembl Gene Model | MGI Sequence Detail 42982 C57BL/6J ±  kb
    transcript ENSMUST00000077968 Ensembl | MGI Sequence Detail 1772 Not Applicable  
    polypeptide ENSMUSP00000077119 Ensembl | MGI Sequence Detail 440 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      7 Sequences
    • InterPro Domains
      IPR022168 Domain of unknown function DUF3699
    Molecular
    Reagents
    less
    • All nucleic 10
      cDNA 10

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1921969
    References
    more
    • Summaries
      All 26
      Phenotypes 8
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.
    last database update
    10/12/2021
    MGI 6.17
    The Jackson Laboratory