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Micalcl Gene Detail
Summary
  • Symbol
    Micalcl
  • Name
    MICAL C-terminal like
  • Synonyms
    4921517J23Rik, Ebitein1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918127
    NCBI Gene: 100504195
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:112368308-112413104 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 58.75 cM, cytoband F2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    562 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918127
protein coding gene Chr7:112368308-112413104 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032869
protein coding gene Chr7:115931224-115981476 (+)
A/J MGP_AJ_G0032852
protein coding gene Chr7:113047936-113096867 (+)
AKR/J MGP_AKRJ_G0032784
protein coding gene Chr7:115894376-115943330 (+)
BALB/cJ MGP_BALBcJ_G0032857
protein coding gene Chr7:112741298-112790384 (+)
C3H/HeJ MGP_C3HHeJ_G0032567
protein coding gene Chr7:115884548-115933533 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033363
protein coding gene Chr7:120675580-120726310 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030335
protein coding gene Chr7:114642507-114691887 (+)
CAST/EiJ MGP_CASTEiJ_G0031895
protein coding gene Chr7:107498229-107549976 (+)
CBA/J MGP_CBAJ_G0032540
protein coding gene Chr7:124644100-124693043 (+)
DBA/2J MGP_DBA2J_G0032692
protein coding gene Chr7:111130445-111179545 (+)
FVB/NJ MGP_FVBNJ_G0032645
protein coding gene Chr7:110980761-111030471 (+)
LP/J MGP_LPJ_G0032786
protein coding gene Chr7:117442377-117493336 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032677
protein coding gene Chr7:126250014-126298955 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033383
protein coding gene Chr7:114895863-114945624 (+)
PWK/PhJ MGP_PWKPhJ_G0031602
protein coding gene Chr7:103970911-104021751 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031450
protein coding gene Chr7:101637389-101690534 (+)
WSB/EiJ MGP_WSBEiJ_G0032008
protein coding gene Chr7:115752549-115803578 (+)



Homology
more
  • Human Ortholog
    MICALCL, MICAL C-terminal like
  • Vertebrate Orthologs
    6
  • Human Ortholog
    MICALCL, MICAL C-terminal like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Ebitein1
  • Links
    NCBI Gene ID: 84953
    neXtProt AC: NX_Q6ZW33
    UniProt: Q6ZW33

  • Chr Location
    11p15.3; chr11:12286900-12359144 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100504195 NCBI Gene Model | MGI Sequence Detail 44797 C57BL/6J ±  kb
transcript NM_027587 RefSeq | MGI Sequence Detail 2397 C57BL/6  
polypeptide NP_081863 RefSeq | MGI Sequence Detail 680 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
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  • All nucleic 12
    cDNA 12

    Microarray probesets 3
References
more
  • Summaries
    All 31
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:61682 Hagiwara N, et al., Sox6 is a candidate gene for p100H myopathy, heart block, and sudden neonatal death. Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):4180-5
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory