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Alkbh3os1 Gene Detail
Summary
  • Symbol
    Alkbh3os1
  • Name
    alkB homolog 3, opposite strand 1
  • Synonyms
    4921507L20Rik
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:1918102
    NCBI Gene: 70852
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:93980034-93983575 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 51.62 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    56 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918102
antisense lncRNA gene Chr2:93980034-93983575 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015447
unclassified non-coding RNA gene Chr2:95502152-95505693 (+)
A/J MGP_AJ_G0015423
unclassified non-coding RNA gene Chr2:91616938-91620479 (+)
AKR/J MGP_AKRJ_G0015387
unclassified non-coding RNA gene Chr2:94194387-94197926 (+)
BALB/cJ MGP_BALBcJ_G0015386
unclassified non-coding RNA gene Chr2:91813218-91816759 (+)
C3H/HeJ MGP_C3HHeJ_G0015209
unclassified non-coding RNA gene Chr2:94465228-94468767 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015840
unclassified non-coding RNA gene Chr2:98752229-98755770 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013579
unclassified non-coding RNA gene Chr2:88097256-88101095 (+)
CAST/EiJ MGP_CASTEiJ_G0014761
unclassified non-coding RNA gene Chr2:95068233-95071788 (+)
CBA/J MGP_CBAJ_G0015190
unclassified non-coding RNA gene Chr2:102196174-102199715 (+)
DBA/2J MGP_DBA2J_G0015284
unclassified non-coding RNA gene Chr2:91224865-91228406 (+)
FVB/NJ MGP_FVBNJ_G0015291
unclassified non-coding RNA gene Chr2:90344810-90348349 (+)
LP/J MGP_LPJ_G0015362
unclassified non-coding RNA gene Chr2:95692690-95696231 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015315
unclassified non-coding RNA gene Chr2:105090387-105093928 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015880
unclassified non-coding RNA gene Chr2:94268062-94271602 (+)
PWK/PhJ MGP_PWKPhJ_G0014549
unclassified non-coding RNA gene Chr2:90975736-90979290 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014337
unclassified non-coding RNA gene Chr2:93830674-93836636 (+)
WSB/EiJ MGP_WSBEiJ_G0014868
unclassified non-coding RNA gene Chr2:94889993-94893532 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Alkbh3os1
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 70852 NCBI Gene Model | MGI Sequence Detail 3542 C57BL/6J ±  kb
transcript NR_045827 RefSeq | MGI Sequence Detail 1550 C57BL/6  
polypeptide Q9D5Y2 UniProt | EBI | MGI Sequence Detail 146 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/04/2019
MGI 6.14
The Jackson Laboratory