Tbc1d8b
Gene Detail

Symbol Name ID

Tbc1d8b TBC1 domain family, member 8B MGI:1918101

Synonyms

4921505D17Rik, 9030605E16Rik

Feature Type

protein coding gene

Genetic Map

Chromosome X

61.35 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

ChrX:139684996-139753405 bp, + strand From VEGA annotation of GRCm38   68410 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:41196  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Tbc1d8b

Human homologs

Human Homolog		TBC1D8B, TBC1 domain family, member 8B (with GRAM domain)
NCBI Gene ID		54885
neXtProt AC		NX_Q0IIM8
Human Chr (Location)		Xq22.3; chrX:106045919-106119380 (+)  GRCh37.p10

Gene Ontology (GO) classifications

All GO classifications: (5 annotations)

Process	regulation of Rab GTPase activity
Component	cellular_component
Function	calcium ion binding, GTPase activator activity, ...

External Resources: FuncBase

Expression

cDNA source data(17)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(18) cDNA(18)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000018731 (Evidence)
Ensembl Gene Model	ENSMUSG00000042473 (Evidence)
Entrez Gene	245638 (Evidence)
UniGene	275869
DFCI	TC1615335, TC1615591, TC1621309
DoTS	DT.101712182, DT.55205837, DT.91358780
Consensus CDS Project	CCDS41146.1
International Mouse Knockout Project Status	Tbc1d8b

Sequences

Length	Strain/Species
genomic	OTTMUSG00000018731	VEGA Gene Model | MGI Sequence Detail	68410	C57BL/6J
transcript	OTTMUST00000045064	VEGA | MGI Sequence Detail	5094	Not Applicable
polypeptide	OTTMUSP00000020255	VEGA | MGI Sequence Detail	1114	Not Applicable

All sequences(25) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(251 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR018249	EF-HAND 2
InterPro	IPR011992	EF-hand-like domain
InterPro	IPR004182	GRAM
InterPro	IPR000195	Rab-GTPase-TBC domain
Protein Ontology	PR:000016122	TBC1 domain family member 8B

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(22)

Other accession IDs

MGI:1923007