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Ttc6 Gene Detail
Summary
  • Symbol
    Ttc6
  • Name
    tetratricopeptide repeat domain 6
  • Synonyms
    4921506M07Rik, AU024163, EG639426, Gm9813, LOC217602
  • Feature Type
    protein coding gene
  • IDs
    MGI:2684915
    NCBI Gene: 70846
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr12:57564113-57737928 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      173816 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 24.70 cM
  • Mapping Data
    4 experiments
Homology
more
  • Human Ortholog
    TTC6, tetratricopeptide repeat domain 6
  • Vertebrate Orthologs
    3
  • Human Ortholog
    TTC6, tetratricopeptide repeat domain 6
    Orthology source: HGNC
  • Synonyms
    C14orf25, NCRNA00291
  • Links
    NCBI Gene ID: 319089
    UniProt: Q86TZ1

  • Chr Location
    14q21.1; chr14:37595199-37842628 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037594 VEGA Gene Model | MGI Sequence Detail 173816 C57BL/6J ±  kb
transcript OTTMUST00000096940 VEGA | MGI Sequence Detail 5782 Not Applicable  
polypeptide OTTMUSP00000054239 VEGA | MGI Sequence Detail 1857 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    732 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal
    IPR006597 Sel1-like repeat
    IPR011990 Tetratricopeptide-like helical domain superfamily
    IPR019734 Tetratricopeptide repeat
    IPR001440 Tetratricopeptide repeat 1
    IPR013026 Tetratricopeptide repeat-containing domain
Molecular
Reagents
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  • All nucleic 10
    cDNA 10

    Microarray probesets 3
Other
Accession IDs
less
MGI:1918096, MGI:3034924, MGI:3645573
References
more
  • Summaries
    All 24
    Developmental Gene Expression 2
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory