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Trak2
Gene Detail
 Symbol
Name
ID
Trak2
trafficking protein, kinesin binding 2
MGI:1918077
Synonyms 2900022D04Rik, 4733401O11Rik, Als2cr3, CALS-C, GRIF1, GRIF-1, mKIAA0549, OIP98
Feature Type protein coding gene
Genetic Map
Chromosome 1
29.20 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:58900449-58973430 bp, - strand
From VEGA annotation of GRCm38

  72982 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:22861  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Trak2

Human
homologs
Human Homolog TRAK2, trafficking protein, kinesin binding 2
NCBI Gene ID 66008
neXtProt AC  NX_O60296
Human Synonyms  ALS2CR3, CALS-C, GRIF1, GRIF-1, MILT2, OIP98
Human Chr (Location)  2q33; chr2:201377207-201451596 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(115) : Gene trapped(113) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Trak2 interacts with 386 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process protein O-linked glycosylation, protein targeting, ...
Component cytoplasm, mitochondrion, ...
Function enzyme binding, GABA receptor binding, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (60)    Tissues (22)    Images (31)
Theiler Stages: 23, 24, 26, 27, 28
Assay TypeResults
RNA in situ 60
cDNA source data(114)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(115) cDNA(115)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000037699 (Evidence)
Ensembl Gene ModelENSMUSG00000026028 (Evidence)
Entrez Gene70827 (Evidence)
UniGene222887
DFCITC1579528, TC1607063, TC1623810
DoTSDT.101299353, DT.101402497, DT.532712, DT.94138380
NIA Mouse Gene IndexU021363
Consensus CDS ProjectCCDS14980.1
International Mouse Knockout Project StatusTrak2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037699 VEGA Gene Model | MGI Sequence Detail 72982 C57BL/6J ±  kb
transcript OTTMUST00000097369 VEGA | MGI Sequence Detail 6189 Not Applicable 
polypeptide OTTMUSP00000054610 VEGA | MGI Sequence Detail 913 Not Applicable 

For the selected sequences
All sequences(61) RefSeq(10) UniProt(7)
Polymorphisms SNPs within 2kb(466 from dbSNP Build 137)    SNPs within 2kb including multiple locations(468)
Protein-related
information
ResourceIDDescription
InterPro IPR006933 HAP1, N-terminal
InterPro IPR022154 Trafficking kinesin-binding protein domain
Protein Ontology PR:000016608 trafficking kinesin-binding protein 2
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:197848 van Spronsen M, et al., TRAK/Milton motor-adaptor proteins steer mitochondrial trafficking to axons and dendrites. Neuron. 2013 Feb 6;77(3):485-502
All references(37)
Other
accession IDs
MGI:1920129, MGI:2138275, MGI:2138542

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory