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Trak2
Gene Detail
Symbol

Name
ID
Trak2
trafficking protein, kinesin binding 2
MGI:1918077
Synonyms
2900022D04Rik, 4733401O11Rik, Als2cr3, CALS-C, GRIF1, GRIF-1, mKIAA0549, OIP98
Feature Type
protein coding gene
Genetic Map
Chromosome 1
29.20 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:58900449-58973430 bp, - strand
From VEGA annotation of GRCm38

  72982 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:22861  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TRAK2
Gene Tree: Trak2

Human
homologs
TRAK2, trafficking protein, kinesin binding 2
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 66008
neXtProt AC: NX_O60296

Human Synonyms: ALS2CR3, CALS-C, GRIF1, GRIF-1, MILT2, OIP98

Human Chr (Location): 2q33; chr2:201377207-201451596 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(115) : Gene trapped(113) Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Trak2 interacts with 385 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process protein O-linked glycosylation, protein targeting, ...
Component cytoplasm, mitochondrion, ...
Function enzyme binding, GABA receptor binding, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (60)    Tissues (22)    Images (31)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 60
cDNA source data(114)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase trak2    NEW 
Molecular
reagents
All nucleic(115) cDNA(115)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000037699 (Evidence)
Ensembl Gene Model ENSMUSG00000026028 (Evidence)
Entrez Gene 70827 (Evidence)
UniGene 222887
DFCI TC1623810, TC1607063, TC1579528
DoTS DT.101402497, DT.532712, DT.101299353, DT.94138380
NIA Mouse Gene Index U021363
Consensus CDS Project CCDS14980.1
International Mouse Phenotyping Consortium Status Trak2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037699 VEGA Gene Model | MGI Sequence Detail 72982 C57BL/6J ±  kb
transcript OTTMUST00000097369 VEGA | MGI Sequence Detail 6189 Not Applicable 
polypeptide OTTMUSP00000054610 VEGA | MGI Sequence Detail 913 Not Applicable 

For the selected sequences
All sequences(61) RefSeq(10) UniProt(7)
Polymorphisms
SNPs within 2kb(466 from dbSNP Build 137)    SNPs within 2kb including multiple locations(468)
Protein-related
information
ResourceIDDescription
InterPro IPR006933 HAP1, N-terminal
InterPro IPR022154 Trafficking kinesin-binding protein domain
Protein Ontology PR:000016608 trafficking kinesin-binding protein 2
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:197848 van Spronsen M, et al., TRAK/Milton motor-adaptor proteins steer mitochondrial trafficking to axons and dendrites. Neuron. 2013 Feb 6;77(3):485-502
All references(36)
Other
accession IDs
MGI:1920129, MGI:2138275, MGI:2138542

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/20/2015
MGI 5.22
The Jackson Laboratory