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Nolc1 Gene Detail
Summary
  • Symbol
    Nolc1
  • Name
    nucleolar and coiled-body phosphoprotein 1
  • Synonyms
    3230402K17Rik, mKIAA0035, NOPP140, P130
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918019
    NCBI Gene: 70769
  • Gene Overview
    MyGene.info: NOLC1
Location & Maps
more
  • Sequence Map
    Chr19:46075863-46085528 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      9666 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 38.75 cM
  • Detailed Genetic Map ± 1 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    NOLC1, nucleolar and coiled-body phosphoprotein 1
  • Human Ortholog
    NOLC1, nucleolar and coiled-body phosphoprotein 1
    Orthology source: HGNC
  • Synonyms
    NOPP130, NOPP140, NS5ATP13, P130
  • Links
    NCBI Gene ID: 9221
    neXtProt AC: NX_Q14978

  • Chr Location
    10q24.32; chr10:102152176-102163871 (+)  GRCh38.p2

  • HCOP
    human homology predictions: NOLC1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    53
  • Gene trapped
    49
  • Targeted
    4
  • Genomic Mutations
    1 involving Nolc1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000015176 Ensembl Gene Model | MGI Sequence Detail 9666 C57BL/6J ±  kb
transcript ENSMUST00000165017 Ensembl | MGI Sequence Detail 3634 Not Applicable  
polypeptide ENSMUSP00000128331 Ensembl | MGI Sequence Detail 702 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    63 from dbSNP Build 142
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR006594 LIS1 homology motif
    IPR007718 SRP40, C-terminal
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 5
Other
Accession IDs
less
MGI:2147430, MGI:2147448, MGI:2147663
References
more
  • Summaries
    All 34
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/24/2016
MGI 6.04
The Jackson Laboratory