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Nolc1 Gene Detail
Summary
  • Symbol
    Nolc1
  • Name
    nucleolar and coiled-body phosphoprotein 1
  • Synonyms
    3230402K17Rik, mKIAA0035, NOPP140, P130
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918019
    NCBI Gene: 70769
  • Gene Overview
    MyGene.info: NOLC1
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:46075863-46085530 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 38.75 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    63 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918019
protein coding gene Chr19:46075847-46085543 (.)
129S1/SvImJ MGP_129S1SvImJ_G0025199
protein coding gene Chr19:45738087-45751357 (+)
A/J MGP_AJ_G0025175
protein coding gene Chr19:43488696-43498463 (+)
AKR/J MGP_AKRJ_G0025144
protein coding gene Chr19:44897094-44906744 (+)
BALB/cJ MGP_BALBcJ_G0025170
protein coding gene Chr19:43544459-43554805 (+)
C3H/HeJ MGP_C3HHeJ_G0024930
protein coding gene Chr19:45067397-45078259 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025613
protein coding gene Chr19:46874073-46887100 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023027
protein coding gene Chr19:42728534-42737559 (+)
CAST/EiJ MGP_CASTEiJ_G0024395
protein coding gene Chr19:44843369-44854950 (+)
CBA/J MGP_CBAJ_G0024910
protein coding gene Chr19:49237360-49246952 (+)
DBA/2J MGP_DBA2J_G0025042
protein coding gene Chr19:43309413-43320577 (+)
FVB/NJ MGP_FVBNJ_G0025003
protein coding gene Chr19:43083681-43093863 (+)
LP/J MGP_LPJ_G0025128
protein coding gene Chr19:45648192-45659111 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025034
protein coding gene Chr19:48593048-48604042 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025671
protein coding gene Chr19:45004051-45013700 (+)
PWK/PhJ MGP_PWKPhJ_G0024144
protein coding gene Chr19:43238515-43248364 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023948
protein coding gene Chr19:43662343-43672712 (+)
WSB/EiJ MGP_WSBEiJ_G0024465
protein coding gene Chr19:45147880-45157566 (+)



Homology
more
  • Human Ortholog
    NOLC1, nucleolar and coiled-body phosphoprotein 1
  • Human Ortholog
    NOLC1, nucleolar and coiled-body phosphoprotein 1
    Orthology source: HGNC
  • Synonyms
    NOPP130, NOPP140, NS5ATP13, P130
  • Links
    NCBI Gene ID: 9221
    neXtProt AC: NX_Q14978
    UniProt: Q14978

  • Chr Location
    10q24.32; chr10:102152176-102163871 (+)  GRCh38.p7

  • HCOP
    human homology predictions: NOLC1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000015176 Ensembl Gene Model | MGI Sequence Detail 9668 C57BL/6J ±  kb
transcript ENSMUST00000223683 Ensembl | MGI Sequence Detail 2398 Not Applicable  
polypeptide ENSMUSP00000153600 Ensembl | MGI Sequence Detail 702 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 5
Other
Accession IDs
less
MGI:2147430, MGI:2147448, MGI:2147663
References
more
  • Summaries
    All 40
    Developmental Gene Expression 3
    Gene Ontology 5
    Phenotypes 10
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:232400 Kone MC, et al., Three-Dimensional Distribution of UBF and Nopp140 in Relationship to Ribosomal DNA Transcription During Mouse Preimplantation Development. Biol Reprod. 2016 Apr;94(4):95

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory