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Nipal1 Gene Detail
Summary
  • Symbol
    Nipal1
  • Name
    NIPA-like domain containing 1
  • Synonyms
    3830408G10Rik, Npal1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917951
    NCBI Gene: 70701
Location & Maps
more
  • Sequence Map
    Chr5:72647795-72671078 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      23284 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 38.44 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    NIPAL1, NIPA like domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    NIPAL1, NIPA like domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    NPAL1
  • Links
    NCBI Gene ID: 152519
    neXtProt AC: NX_Q6NVV3

  • Chr Location
    4p12; chr4:48016774-48040173 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    19 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Nipal1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000054646 VEGA Gene Model | MGI Sequence Detail 23284 C57BL/6J ±  kb
transcript OTTMUST00000135475 VEGA | MGI Sequence Detail 4206 Not Applicable  
polypeptide OTTMUSP00000071683 VEGA | MGI Sequence Detail 416 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    288 from dbSNP Build 142
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000011346 magnesium transporter NIPA3
  • InterPro Domains
    IPR008521 Magnesium transporter NIPA
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 6
References
more
  • Summaries
    All 26
    Gene Ontology 4
    Phenotypes 19
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory