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3830417A13Rik Gene Detail
Summary
  • Symbol
    3830417A13Rik
  • Name
    RIKEN cDNA 3830417A13 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917946
    NCBI Gene: 70696
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:64173548-64178778 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 34.57 cM, cytoband A5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917946
protein coding gene ChrX:64173548-64178779 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035765
protein coding gene ChrX:59671867-59677097 (+)
A/J MGP_AJ_G0035747
protein coding gene ChrX:59870378-59875608 (+)
AKR/J MGP_AKRJ_G0035667
protein coding gene ChrX:61499113-61504343 (+)
BALB/cJ MGP_BALBcJ_G0035734
protein coding gene ChrX:59214156-59219386 (+)
C3H/HeJ MGP_C3HHeJ_G0035437
protein coding gene ChrX:60310994-60316224 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036263
protein coding gene ChrX:61462392-61467622 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033115
protein coding gene ChrX:59266214-59271421 (+)
CAST/EiJ MGP_CASTEiJ_G0034729
protein coding gene ChrX:45849214-45854439 (+)
CBA/J MGP_CBAJ_G0035411
protein coding gene ChrX:63179752-63184982 (+)
DBA/2J MGP_DBA2J_G0035565
protein coding gene ChrX:59454802-59460032 (+)
FVB/NJ MGP_FVBNJ_G0035515
protein coding gene ChrX:58945877-58951195 (+)
LP/J MGP_LPJ_G0035653
protein coding gene ChrX:60373541-60378771 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035551
protein coding gene ChrX:64953921-64959151 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036279
protein coding gene ChrX:59616344-59621574 (+)
PWK/PhJ MGP_PWKPhJ_G0034425
protein coding gene ChrX:44074917-44080150 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034268
protein coding gene ChrX:46801771-46807021 (+)
WSB/EiJ MGP_WSBEiJ_G0034872
protein coding gene ChrX:59076185-59081415 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031179 Ensembl Gene Model | MGI Sequence Detail 5231 C57BL/6J ±  kb
transcript ENSMUST00000033522 Ensembl | MGI Sequence Detail 1649 Not Applicable  
polypeptide ENSMUSP00000033522 Ensembl | MGI Sequence Detail 303 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR002190 MAGE homology domain
    IPR041898 MAGE homology domain, winged helix WH1 motif
    IPR041899 MAGE homology domain, winged helix WH2 motif
    IPR037445 Melanoma-associated antigen
    IPR021072 Melanoma associated antigen, N-terminal
Molecular
Reagents
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  • All nucleic 13
    cDNA 13

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:209956 Liakath-Ali K, et al., Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen. Nat Commun. 2014;5:3540

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory