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Hrct1 Gene Detail
Summary
  • Symbol
    Hrct1
  • Name
    histidine rich carboxyl terminus 1
  • Synonyms
    3830408D24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917945
    NCBI Gene: 100039781
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:43727198-43728110 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 23.05 cM, cytoband B1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    70 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917945
protein coding gene Chr4:43727188-43728639 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028224
protein coding gene Chr4:41866181-41867632 (+)
A/J MGP_AJ_G0028180
protein coding gene Chr4:40371027-40372478 (+)
AKR/J MGP_AKRJ_G0028132
protein coding gene Chr4:41289392-41290843 (+)
BALB/cJ MGP_BALBcJ_G0028200
protein coding gene Chr4:40461594-40463045 (+)
C3H/HeJ MGP_C3HHeJ_G0027922
protein coding gene Chr4:41921720-41923171 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028641
protein coding gene Chr4:43438969-43440420 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025953
protein coding gene Chr4:37816584-37818035 (+)
CAST/EiJ MGP_CASTEiJ_G0027362
protein coding gene Chr4:41431928-41433386 (+)
CBA/J MGP_CBAJ_G0027888
protein coding gene Chr4:44773859-44775310 (+)
DBA/2J MGP_DBA2J_G0028037
protein coding gene Chr4:40282751-40284202 (+)
FVB/NJ MGP_FVBNJ_G0028004
protein coding gene Chr4:39513742-39515193 (+)
LP/J MGP_LPJ_G0028136
protein coding gene Chr4:41918771-41920222 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028028
protein coding gene Chr4:48003278-48004729 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028677
protein coding gene Chr4:41506653-41508104 (+)
PWK/PhJ MGP_PWKPhJ_G0027088
protein coding gene Chr4:40318866-40320329 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026914
protein coding gene Chr4:41060379-41061837 (+)
WSB/EiJ MGP_WSBEiJ_G0027442
protein coding gene Chr4:41392918-41394369 (+)



Homology
more
  • Human Ortholog
    HRCT1, histidine rich carboxyl terminus 1
  • Human Ortholog
    HRCT1, histidine rich carboxyl terminus 1
    Orthology source: HGNC
  • Synonyms
    LGLL338, PRO537, UNQ338
  • Links
    NCBI Gene ID: 646962
    neXtProt AC: NX_Q6UXD1
    UniProt: Q6UXD1

  • Chr Location
    9p13.3; chr9:35906192-35907141 (+)  GRCh38.p7

  • HCOP
    human homology predictions: HRCT1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100039781 NCBI Gene Model | MGI Sequence Detail 913 C57BL/6J ±  kb
transcript NM_027511 RefSeq | MGI Sequence Detail 936 C57BL/6  
polypeptide Q9D6B9 UniProt | EBI | MGI Sequence Detail 109 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190524 Shalom-Barak T, et al., Placental PPARgamma regulates spatiotemporally diverse genes and a unique metabolic network. Dev Biol. 2012 Dec 1;372(1):143-55

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory