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Hrct1 Gene Detail
Summary
  • Symbol
    Hrct1
  • Name
    histidine rich carboxyl terminus 1
  • Synonyms
    3830408D24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917945
    NCBI Gene: 100039781
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:43727198-43728110 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 23.05 cM, cytoband B1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    70 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917945
protein coding gene Chr4:43727188-43728639 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028224
protein coding gene Chr4:41866181-41867632 (+)
A/J MGP_AJ_G0028180
protein coding gene Chr4:40371027-40372478 (+)
AKR/J MGP_AKRJ_G0028132
protein coding gene Chr4:41289392-41290843 (+)
BALB/cJ MGP_BALBcJ_G0028200
protein coding gene Chr4:40461594-40463045 (+)
C3H/HeJ MGP_C3HHeJ_G0027922
protein coding gene Chr4:41921720-41923171 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028641
protein coding gene Chr4:43438969-43440420 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025953
protein coding gene Chr4:37816584-37818035 (+)
CAST/EiJ MGP_CASTEiJ_G0027362
protein coding gene Chr4:41431928-41433386 (+)
CBA/J MGP_CBAJ_G0027888
protein coding gene Chr4:44773859-44775310 (+)
DBA/2J MGP_DBA2J_G0028037
protein coding gene Chr4:40282751-40284202 (+)
FVB/NJ MGP_FVBNJ_G0028004
protein coding gene Chr4:39513742-39515193 (+)
LP/J MGP_LPJ_G0028136
protein coding gene Chr4:41918771-41920222 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028028
protein coding gene Chr4:48003278-48004729 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028677
protein coding gene Chr4:41506653-41508104 (+)
PWK/PhJ MGP_PWKPhJ_G0027088
protein coding gene Chr4:40318866-40320329 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026914
protein coding gene Chr4:41060379-41061837 (+)
WSB/EiJ MGP_WSBEiJ_G0027442
protein coding gene Chr4:41392918-41394369 (+)



Homology
more
  • Human Ortholog
    HRCT1, histidine rich carboxyl terminus 1
  • Human Ortholog
    HRCT1, histidine rich carboxyl terminus 1
    Orthology source: HGNC
  • Synonyms
    LGLL338, PRO537, UNQ338
  • Links
    NCBI Gene ID: 646962
    neXtProt AC: NX_Q6UXD1
    UniProt: Q6UXD1

  • Chr Location
    9p13.3; chr9:35906192-35907141 (+)  GRCh38.p7

  • HCOP
    human homology predictions: HRCT1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100039781 NCBI Gene Model | MGI Sequence Detail 913 C57BL/6J ±  kb
transcript NM_027511 RefSeq | MGI Sequence Detail 936 C57BL/6  
polypeptide Q9D6B9 UniProt | EBI | MGI Sequence Detail 109 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190524 Shalom-Barak T, et al., Placental PPARgamma regulates spatiotemporally diverse genes and a unique metabolic network. Dev Biol. 2012 Dec 1;372(1):143-55

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory