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5730460C07Rik Gene Detail
Summary
  • Symbol
    5730460C07Rik
  • Name
    RIKEN cDNA 5730460C07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917844
    NCBI Gene: 70594
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:153789305-153792087 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 78.62 cM, cytoband H4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917844
lncRNA gene Chr3:153789305-153792087 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006371
lincRNA gene Chr3:157744078-157746862 (-)
A/J MGP_AJ_G0006364
lincRNA gene Chr3:152004471-152007253 (-)
AKR/J MGP_AKRJ_G0006339
lincRNA gene Chr3:156072139-156074921 (-)
BALB/cJ MGP_BALBcJ_G0006338
lincRNA gene Chr3:151814016-151816788 (-)
C3H/HeJ MGP_C3HHeJ_G0006289
lincRNA gene Chr3:156441747-156444529 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006503
lincRNA gene Chr3:162884909-162887691 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005797
lincRNA gene Chr3:146782113-146784915 (-)
CAST/EiJ MGP_CASTEiJ_G0006223
lincRNA gene Chr3:156549804-156552601 (-)
CBA/J MGP_CBAJ_G0006272
lincRNA gene Chr3:168754570-168757342 (-)
DBA/2J MGP_DBA2J_G0006293
lincRNA gene Chr3:151086325-151089107 (-)
FVB/NJ MGP_FVBNJ_G0006315
lincRNA gene Chr3:148458547-148461329 (-)
LP/J MGP_LPJ_G0006375
lincRNA gene Chr3:159078048-159080846 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006305
lincRNA gene Chr3:177234235-177237009 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006509
lincRNA gene Chr3:155710702-155713472 (-)
PWK/PhJ MGP_PWKPhJ_G0006160
lincRNA gene Chr3:150999655-151002411 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006073
lincRNA gene Chr3:153866976-153869775 (-)
WSB/EiJ MGP_WSBEiJ_G0006269
lincRNA gene Chr3:156696103-156698876 (-)



Homology
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Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 70594 NCBI Gene Model | MGI Sequence Detail 2783 C57BL/6J ±  kb
transcript NR_045801 RefSeq | MGI Sequence Detail 1834 C57BL/6  
polypeptide Q9CYH7 UniProt | EBI | MGI Sequence Detail 101 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory