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Pnrc1 Gene Detail
Summary
  • Symbol
    Pnrc1
  • Name
    proline-rich nuclear receptor coactivator 1
  • Synonyms
    5730463C12Rik, B4-2, Prol2, PRR2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917838
    NCBI Gene: 108767
  • Gene Overview
    MyGene.info: PNRC1
Location & Maps
more
  • Sequence Map
    Chr4:33245423-33290163 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      44741 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 14.75 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    PNRC1, proline rich nuclear receptor coactivator 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    PNRC1, proline rich nuclear receptor coactivator 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    B4-2, PNAS-145, PROL2, PRR2
  • Links
    NCBI Gene ID: 10957
    neXtProt AC: NX_Q12796

  • Chr Location
    6q15; chr6:89080710-89085160 (+)  GRCh38.p2
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    28
  • Chemically and radiation induced
    1
  • Gene trapped
    25
  • Targeted
    2
  • Genomic Mutations
    1 involving Pnrc1
  • Incidental Mutations
    APF , CvDC
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    94
  • Tissues
    94
  • cDNA Data
    98
  • Literature Summary
    3
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004941 VEGA Gene Model | MGI Sequence Detail 44741 C57BL/6J ±  kb
transcript OTTMUST00000010991 VEGA | MGI Sequence Detail 1648 Not Applicable  
polypeptide OTTMUSP00000005132 VEGA | MGI Sequence Detail 297 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    179 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR026780 Proline-rich nuclear receptor coactivator 1/2
Molecular
Reagents
less
  • All nucleic 100
    cDNA 98
    Primer pair 1
    Other 1

    Microarray probesets 7
References
more
  • Summaries
    All 29
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:209112 Shimizu H, et al., The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. PLoS One. 2013;8(10):e75754
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/13/2016
MGI 6.05 		The Jackson Laboratory