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Pnrc1
Gene Detail
Symbol

Name
ID
Pnrc1
proline-rich nuclear receptor coactivator 1
MGI:1917838
Synonyms
5730463C12Rik, B4-2, Prol2, PRR2
Feature Type
protein coding gene
Genetic Map
Chromosome 4
14.75 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:33245423-33290163 bp, - strand
From VEGA annotation of GRCm38

  44741 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4960  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Pnrc1

Human
homologs
Human Homolog PNRC1, proline-rich nuclear receptor coactivator 1
NCBI Gene ID 10957
neXtProt AC  NX_Q12796
Human Synonyms  B4-2, PNAS-145, PROL2, PRR2
Human Chr (Location)  6q15; chr6:89080710-89085160 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(27) : Gene trapped(25) Targeted(2)
Incidental mutations (data from APF )
Interactions
Pnrc1 interacts with 200 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (94)    Tissues (94)    Images (16)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(98)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(100) cDNA(98) Primer pair(1) Other(1)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000004941 (Evidence)
Ensembl Gene ModelENSMUSG00000040128 (Evidence)
Entrez Gene108767 (Evidence)
UniGene27769
DFCITC1629074, TC1575642
DoTSDT.482440
NIA Mouse Gene IndexU024922
Consensus CDS ProjectCCDS18023.1
International Mouse Knockout Project StatusPnrc1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004941 VEGA Gene Model | MGI Sequence Detail 44741 C57BL/6J ±  kb
transcript OTTMUST00000010991 VEGA | MGI Sequence Detail 1648 Not Applicable 
polypeptide OTTMUSP00000005132 VEGA | MGI Sequence Detail 297 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(185 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026780 Proline-rich nuclear receptor coactivator 1/2
Protein Ontology PR:000012951 proline-rich nuclear receptor coactivator 1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:209112 Shimizu H, et al., The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. PLoS One. 2013;8(10):e75754
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory