Pnrc1
Gene Detail

Symbol

Name
ID

Pnrc1
proline-rich nuclear receptor coactivator 1
MGI:1917838

Synonyms

5730463C12Rik, B4-2, Prol2, PRR2

Feature Type

protein coding gene

Genetic Map

Chromosome 4
14.75 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr4:33245423-33290163 bp, - strand From VEGA annotation of GRCm38   44741 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:4960  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Pnrc1

Human
homologs

Human Homolog		PNRC1, proline-rich nuclear receptor coactivator 1
NCBI Gene ID		10957
neXtProt AC		NX_Q12796
Human Synonyms		B4-2, PNAS-145, PROL2, PRR2
Human Chr (Location)		6q15; chr6:89080710-89085160 (+)  GRCh38

Mutations,
alleles, and
phenotypes

All mutations/alleles(27) : Gene trapped(25) Targeted(2)
Incidental mutations (data from APF )

Interactions

Pnrc1 interacts with 200 markers (Mir1a-1, Mir1a-2, Mir1b, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (3 records)

Data Summary: Results (94)    Tissues (94)    Images (16)    Tissue x Stage Matrix (view)

Assay Type	Results
RNA in situ	94

cDNA source data(98)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(100) cDNA(98) Primer pair(1) Other(1)
Microarray probesets(7)

Other database
links

VEGA Gene Model	OTTMUSG00000004941 (Evidence)
Ensembl Gene Model	ENSMUSG00000040128 (Evidence)
Entrez Gene	108767 (Evidence)
UniGene	27769
DFCI	TC1629074, TC1575642
DoTS	DT.482440
NIA Mouse Gene Index	U024922
Consensus CDS Project	CCDS18023.1
International Mouse Knockout Project Status	Pnrc1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000004941	VEGA Gene Model | MGI Sequence Detail	44741	C57BL/6J
transcript	OTTMUST00000010991	VEGA | MGI Sequence Detail	1648	Not Applicable
polypeptide	OTTMUSP00000005132	VEGA | MGI Sequence Detail	297	Not Applicable

All sequences(38) RefSeq(2) UniProt(2)

Polymorphisms

SNPs within 2kb(185 from dbSNP Build 137)

Protein-related
information

Resource	ID	Description
InterPro	IPR026780	Proline-rich nuclear receptor coactivator 1/2
Protein Ontology	PR:000012951	proline-rich nuclear receptor coactivator 1

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:209112 Shimizu H, et al., The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. PLoS One. 2013;8(10):e75754
All references(33)