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Bbx
Gene Detail
 Symbol
Name
ID
Bbx
bobby sox homolog (Drosophila)
MGI:1917758
Synonyms 5530401J07Rik, 5730403O13Rik
Feature Type protein coding gene
Genetic Map
Chromosome 16
31.35 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr16:50191844-50432390 bp, - strand
From VEGA annotation of GRCm38

  240547 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10634  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Bbx

Human
homologs
Human Homolog BBX, bobby sox homolog (Drosophila)
NCBI Gene ID 56987
neXtProt AC  NX_Q8WY36
Human Synonyms  ARTC1, HBP2, HSPC339, MDS001
Human Chr (Location)  3q13.1; chr3:107522936-107811329 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(52) : Gene trapped(50) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Bbx interacts with 540 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process bone development, regulation of transcription, DNA-templated, ...
Component cytoplasm, nucleus
Function DNA binding
External Resources: FuncBase
Expression
Literature Summary: (7 records)
Data Summary: Results (135)    Tissues (64)    Images (25)
Theiler Stages: 2, 3, 4, 5, 17, 21, 23, 28
Assay TypeResults
RNA in situ 127
RT-PCR 8
cDNA source data(105)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(106) cDNA(105) Primer pair(1)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000017264 (Evidence)
Ensembl Gene ModelENSMUSG00000022641 (Evidence)
Entrez Gene70508 (Evidence)
UniGene28940
DFCITC1579155, TC1584657, TC1587916, TC1600634, TC1603408, TC1612023, TC1631004
DoTSDT.101138683, DT.101238979, DT.101264801, DT.101382737, DT.101382739, DT.40145858, DT.91279420, DT.94251217, DT.94251227, DT.97389003, DT.97394584, DT.99851224
NIA Mouse Gene IndexU037100, U363135
PDB1WZ6
Consensus CDS ProjectCCDS37354.1
International Mouse Knockout Project StatusBbx
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017264 VEGA Gene Model | MGI Sequence Detail 240547 C57BL/6J ±  kb
transcript OTTMUST00000041776 VEGA | MGI Sequence Detail 8743 Not Applicable 
polypeptide OTTMUSP00000018781 VEGA | MGI Sequence Detail 907 Not Applicable 

For the selected sequences
All sequences(133) RefSeq(44) UniProt(5)
Polymorphisms SNPs within 2kb(2105 from dbSNP Build 137)    SNPs within 2kb including multiple locations(2111)
Protein-related
information
ResourceIDDescription
InterPro IPR009071 High mobility group (HMG) box domain
InterPro IPR019102 HMG box transcription factor BBX, domain of unknown function DUF2028
Protein Ontology PR:000004671 HMG box transcription factor BBX
References (Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:188142 Bassett JH, et al., Rapid-throughput skeletal phenotyping of 100 knockout mice identifies 9 new genes that determine bone strength. PLoS Genet. 2012 Aug;8(8):e1002858
All references(43)
Other
accession IDs
MGI:1921753

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory