About   Help   FAQ
Arpin
Gene Detail
Symbol

Name
ID
Arpin
actin-related protein 2/3 complex inhibitor
MGI:1917670
Synonyms
2610034B18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 7
45.27 cM, cytoband D2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:79925361-79935359 bp, - strand
From VEGA annotation of GRCm38

  9999 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:128480  Vertebrate Homology Class
2 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: ARPIN, C15orf38-AP3S2
Gene Tree: Arpin

Human
homologs
ARPIN, actin-related protein 2/3 complex inhibitor
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 348110
neXtProt AC: NX_Q7Z6K5

Human Synonyms: C15orf38

Human Chr (Location): 15q26.1; chr15:89896532-89912990 (-)  GRCh38.p2

  1 More Homolog(s):
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(1) Targeted(3)
Incidental mutations (data from APF )
Interactions
Arpin interacts with 147 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component cell projection, lamellipodium
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(5)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: ZFIN arpin    NEW 
Molecular
reagents
All nucleic(5) cDNA(5)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000023196 (Evidence)
Ensembl Gene Model ENSMUSG00000039043 (Evidence)
Entrez Gene 70420 (Evidence)
DFCI TC1577038
DoTS DT.489247
NIA Mouse Gene Index U028753
Consensus CDS Project CCDS21390.1
International Mouse Phenotyping Consortium Status Arpin
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023196 VEGA Gene Model | MGI Sequence Detail 9999 C57BL/6J ±  kb
transcript OTTMUST00000056119 VEGA | MGI Sequence Detail 2277 Not Applicable 
polypeptide OTTMUSP00000026929 VEGA | MGI Sequence Detail 226 Not Applicable 

For the selected sequences
All sequences(21) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(53 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018889 Uncharacterised protein family UPF0552
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:202749 Dang I, et al., Inhibitory signalling to the Arp2/3 complex steers cell migration. Nature. 2013 Nov 14;503(7475):281-4
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/30/2015
MGI 5.22
The Jackson Laboratory