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Ttc9c Gene Detail
Summary
  • Symbol
    Ttc9c
  • Name
    tetratricopeptide repeat domain 9C
  • Synonyms
    2210019E14Rik, 6330408J23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917637
    NCBI Gene: 70387
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:8809075-8819333 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 5.67 cM, cytoband A
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917637
protein coding gene Chr19:8809066-8819455 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024811
protein coding gene Chr19:6092048-6102306 (-)
A/J MGP_AJ_G0024779
protein coding gene Chr19:5761534-5771783 (-)
AKR/J MGP_AKRJ_G0024754
protein coding gene Chr19:5853699-5863956 (-)
BALB/cJ MGP_BALBcJ_G0024779
protein coding gene Chr19:5866260-5876630 (-)
C3H/HeJ MGP_C3HHeJ_G0024545
protein coding gene Chr19:5933582-5943831 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025226
protein coding gene Chr19:6212194-6231336 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022655
protein coding gene Chr19:6009590-6019958 (-)
CAST/EiJ MGP_CASTEiJ_G0024018
protein coding gene Chr19:5583332-5593607 (-)
CBA/J MGP_CBAJ_G0024519
protein coding gene Chr19:6330936-6341198 (-)
DBA/2J MGP_DBA2J_G0024646
protein coding gene Chr19:5593004-5604111 (-)
FVB/NJ MGP_FVBNJ_G0024613
protein coding gene Chr19:5666780-5677038 (-)
LP/J MGP_LPJ_G0024733
protein coding gene Chr19:5980393-5990651 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024640
protein coding gene Chr19:6196900-6207158 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025275
protein coding gene Chr19:5896700-5906970 (-)
PWK/PhJ MGP_PWKPhJ_G0023763
protein coding gene Chr19:5262120-5272834 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023568
protein coding gene Chr19:5504542-5518028 (-)
WSB/EiJ MGP_WSBEiJ_G0024080
protein coding gene Chr19:5865923-5876185 (-)



Homology
more
  • Human Ortholog
    TTC9C, tetratricopeptide repeat domain 9C
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TTC9C, tetratricopeptide repeat domain 9C
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 283237
    neXtProt AC: NX_Q8N5M4
    UniProt: Q8N5M4

  • Chr Location
    11q12.3; chr11:62728073-62738636 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000071660 Ensembl Gene Model | MGI Sequence Detail 10259 C57BL/6J ±  kb
transcript ENSMUST00000096751 Ensembl | MGI Sequence Detail 3509 Not Applicable  
polypeptide ENSMUSP00000094513 Ensembl | MGI Sequence Detail 171 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 70
    cDNA 70

    Microarray probesets 7
Other
Accession IDs
less
MGI:1917964
References
more
  • Summaries
    All 25
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory