Fam114a2 Gene Detail

Summary

• Symbol
  Fam114a2
• Name
  family with sequence similarity 114, member A2
• Synonyms
  1810073G14Rik, 9030624B09Rik

• Feature Type
  protein coding gene
• IDs
  MGI:1917629
  NCBI Gene: 67726
• Gene Overview
  MyGene.info: FAM114A2
• Alliance
  gene page

Location & Maps

• Sequence Map
  Chr11:57482993-57518617 bp, - strand
• From VEGA annotation of GRCm38
  

  Mouse Genome Browser
  
  

• Download
  Sequence
    35625 bp   ±  kb flank
  
  
• Genome Browsers
  VEGA | Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 35.27 cM, cytoband B2
• Mapping Data
  3 experiments

Homology

• Human Ortholog
  FAM114A2, family with sequence similarity 114 member A2

• Vertebrate Orthologs
  9

• Human Ortholog
  FAM114A2, family with sequence similarity 114 member A2
  Orthology source: HomoloGene, HGNC
• Synonyms
  133K02, C5orf3
• Links
  HGNC:1333

  NCBI Gene ID: 10827

  neXtProt AC: NX_Q9NRY5

  UniProt: Q9NRY5

  
  
• Chr Location
  5q33.2; chr5:153990131-154038938 (-)  GRCh38.p7

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• HomoloGene
  Vertebrate Homology Class 10270
  1 human;1 mouse;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  
• HCOP
  human homology predictions: FAM114A2
• Gene Tree
  Fam114a2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  9
• Chemically induced (other)
  1
• Gene trapped
  6
• Targeted
  2
• Genomic Mutations
  1 involving Fam114a2
• Incidental Mutations
  Mutagenetix , APF , CvDC
• Find Mice (IMSR)
  14 strains or lines available

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• Assay Results
  110
• Tissues
  94
• cDNA Data
  120
• Literature Summary
  2

Images

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas
• Other Vertebrate Links
  Xenbase fam114a2

Interactions

• Fam114a2 interacts with 163 markers (Mir7-1, Mir7-2, Mir7b, ...) View All

Sequences &
Gene Models

• All Sequences
  54
• RefSeq
  22
• UniProt
  1
• CCDS
  CCDS24717.1, CCDS48801.1
• UniGene
  25632

• VEGA
  OTTMUSG00000006324 (Evidence)
• Ensembl
  ENSMUSG00000020523 (Evidence)
• NCBI Gene
  67726

Representative Sequences			Length	Strain/Species
genomic	OTTMUSG00000006324	VEGA Gene Model | MGI Sequence Detail	35625	C57BL/6J
transcript	OTTMUST00000014359	VEGA | MGI Sequence Detail	1765	Not Applicable
polypeptide	OTTMUSP00000006657	VEGA | MGI Sequence Detail	497	Not Applicable

Polymorphisms

• SNPs within 2kb
  412 from dbSNP Build 142

Protein
Information

• UniProt
  1 Sequence
• Protein Ontology
  PR:000031699 protein FAM114A2
  (term hierarchy)
• InterPro Domains
  IPR007998 Protein of unknown function DUF719

Molecular
Reagents

• All nucleic 120

  cDNA 120

  
  

  Microarray probesets 5

Other
Accession IDs

MGI:1914976

References

• Summaries
  All 30

  Developmental Gene Expression 2

  Phenotypes 6
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582