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Gpatch2l Gene Detail
Summary
  • Symbol
    Gpatch2l
  • Name
    G patch domain containing 2 like
  • Synonyms
    1700020O03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917623
    NCBI Gene: 70373
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:86241858-86291784 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 40.36 cM, cytoband D3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    226 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917623
protein coding gene Chr12:86241795-86294657 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019969
protein coding gene Chr12:87070521-87121799 (+)
A/J MGP_AJ_G0019926
protein coding gene Chr12:83758317-83809227 (+)
AKR/J MGP_AKRJ_G0019902
protein coding gene Chr12:86031489-86083083 (+)
BALB/cJ MGP_BALBcJ_G0019906
protein coding gene Chr12:84097803-84147994 (+)
C3H/HeJ MGP_C3HHeJ_G0019712
protein coding gene Chr12:86515953-86566305 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020357
protein coding gene Chr12:89565592-89616083 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017975
protein coding gene Chr12:80651395-80700825 (+)
CAST/EiJ MGP_CASTEiJ_G0019262
protein coding gene Chr12:81494154-81548123 (+)
CBA/J MGP_CBAJ_G0019683
protein coding gene Chr12:93011779-93068116 (+)
DBA/2J MGP_DBA2J_G0019797
protein coding gene Chr12:83266878-83316938 (+)
FVB/NJ MGP_FVBNJ_G0019784
protein coding gene Chr12:82241592-82291548 (+)
LP/J MGP_LPJ_G0019871
protein coding gene Chr12:86948235-86997837 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019823
protein coding gene Chr12:95801731-95855607 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020390
protein coding gene Chr12:85654445-85712124 (+)
PWK/PhJ MGP_PWKPhJ_G0019025
protein coding gene Chr12:77794752-77845357 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018821
protein coding gene Chr12:80132783-80184772 (+)
WSB/EiJ MGP_WSBEiJ_G0019314
protein coding gene Chr12:86381496-86432652 (+)



Homology
more
  • Human Ortholog
    GPATCH2L, G-patch domain containing 2 like
  • Vertebrate Orthologs
    7
  • Human Ortholog
    GPATCH2L, G-patch domain containing 2 like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C14orf118
  • Links
    NCBI Gene ID: 55668
    neXtProt AC: NX_Q9NWQ4
    UniProt: Q9NWQ4

  • Chr Location
    14q24.3; chr14:76151885-76214473 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    1
  • Gene trapped
    8
  • Targeted
    3
  • Genomic Mutations
    1 involving Gpatch2l
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021254 Ensembl Gene Model | MGI Sequence Detail 49927 C57BL/6J ±  kb
transcript ENSMUST00000221368 Ensembl | MGI Sequence Detail 4355 Not Applicable  
polypeptide ENSMUSP00000152284 Ensembl | MGI Sequence Detail 482 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 62
    cDNA 62

    Microarray probesets 5
References
more
  • Summaries
    All 30
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/20/2020
MGI 6.16
The Jackson Laboratory