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Gpatch2l Gene Detail
Summary
  • Symbol
    Gpatch2l
  • Name
    G patch domain containing 2 like
  • Synonyms
    1700020O03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917623
    NCBI Gene: 70373
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:86241858-86291784 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 40.36 cM, cytoband D3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    226 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917623
protein coding gene Chr12:86241838-86294657 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019969
protein coding gene Chr12:87070521-87121799 (+)
A/J MGP_AJ_G0019926
protein coding gene Chr12:83758317-83809227 (+)
AKR/J MGP_AKRJ_G0019902
protein coding gene Chr12:86031489-86083083 (+)
BALB/cJ MGP_BALBcJ_G0019906
protein coding gene Chr12:84097803-84147994 (+)
C3H/HeJ MGP_C3HHeJ_G0019712
protein coding gene Chr12:86515953-86566305 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020357
protein coding gene Chr12:89565592-89616083 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017975
protein coding gene Chr12:80651395-80700825 (+)
CAST/EiJ MGP_CASTEiJ_G0019262
protein coding gene Chr12:81494154-81548123 (+)
CBA/J MGP_CBAJ_G0019683
protein coding gene Chr12:93011779-93068116 (+)
DBA/2J MGP_DBA2J_G0019797
protein coding gene Chr12:83266878-83316938 (+)
FVB/NJ MGP_FVBNJ_G0019784
protein coding gene Chr12:82241592-82291548 (+)
LP/J MGP_LPJ_G0019871
protein coding gene Chr12:86948235-86997837 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019823
protein coding gene Chr12:95801731-95855607 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020390
protein coding gene Chr12:85654445-85712124 (+)
PWK/PhJ MGP_PWKPhJ_G0019025
protein coding gene Chr12:77794752-77845357 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018821
protein coding gene Chr12:80132783-80184772 (+)
WSB/EiJ MGP_WSBEiJ_G0019314
protein coding gene Chr12:86381496-86432652 (+)



Homology
more
  • Human Ortholog
    GPATCH2L, G-patch domain containing 2 like
  • Vertebrate Orthologs
    7
  • Human Ortholog
    GPATCH2L, G-patch domain containing 2 like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C14orf118
  • Links
    NCBI Gene ID: 55668
    neXtProt AC: NX_Q9NWQ4
    UniProt: Q9NWQ4

  • Chr Location
    14q24.3; chr14:76151885-76214473 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    1
  • Gene trapped
    8
  • Targeted
    3
  • Genomic Mutations
    1 involving Gpatch2l
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021254 Ensembl Gene Model | MGI Sequence Detail 49927 C57BL/6J ±  kb
transcript ENSMUST00000221368 Ensembl | MGI Sequence Detail 4355 Not Applicable  
polypeptide ENSMUSP00000152284 Ensembl | MGI Sequence Detail 482 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 62
    cDNA 62

    Microarray probesets 5
References
more
  • Summaries
    All 30
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory