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Arl16 Gene Detail
Summary
  • Symbol
    Arl16
  • Name
    ADP-ribosylation factor-like 16
  • Synonyms
    2600005N12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917567
    NCBI Gene: 70317
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:120355692-120358433 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 84.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917567
 protein coding gene Chr11:120355152-120358433 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019503
 protein coding gene Chr11:124933987-124936728 (-)
A/J MGP_AJ_G0019471
 protein coding gene Chr11:119373040-119375781 (-)
AKR/J MGP_AKRJ_G0019441
 protein coding gene Chr11:122964110-122966851 (-)
BALB/cJ MGP_BALBcJ_G0019446
 protein coding gene Chr11:119728567-119731308 (-)
C3H/HeJ MGP_C3HHeJ_G0019252
 protein coding gene Chr11:123300417-123303158 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019894
 protein coding gene Chr11:128711552-128714293 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017520
 protein coding gene Chr11:116361379-116364268 (-)
CAST/EiJ MGP_CASTEiJ_G0018806
 protein coding gene Chr11:124789923-124792663 (-)
CBA/J MGP_CBAJ_G0019223
 protein coding gene Chr11:133747164-133749905 (-)
DBA/2J MGP_DBA2J_G0019335
 protein coding gene Chr11:118741864-118744605 (-)
FVB/NJ MGP_FVBNJ_G0019327
 protein coding gene Chr11:118451415-118454156 (-)
LP/J MGP_LPJ_G0019407
 protein coding gene Chr11:125234197-125236938 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019360
 protein coding gene Chr11:132590702-132593443 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019934
 protein coding gene Chr11:123651072-123653813 (-)
PWK/PhJ MGP_PWKPhJ_G0018572
 protein coding gene Chr11:120175188-120178121 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018364
 protein coding gene Chr11:123410909-123413660 (-)
WSB/EiJ MGP_WSBEiJ_G0018858
 protein coding gene Chr11:123640883-123643623 (-)



Homology
more
  • Human Ortholog
    ARL16, ADP ribosylation factor like GTPase 16
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ARL16, ADP ribosylation factor like GTPase 16
  • Links
    NCBI Gene ID: 339231
    neXtProt AC: NX_Q0P5N6
    UniProt: Q0P5N6

  • Chr Location
    17q25.3; chr17:81681165-81683797 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000057594 Ensembl Gene Model | MGI Sequence Detail 2742 C57BL/6J ±  kb
    transcript ENSMUST00000076921 Ensembl | MGI Sequence Detail 911 Not Applicable  
    polypeptide ENSMUSP00000076188 Ensembl | MGI Sequence Detail 173 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • InterPro Domains
      IPR027417 P-loop containing nucleoside triphosphate hydrolase
      IPR006689 Small GTPase superfamily, ARF/SAR type
    Molecular
    Reagents
    less
    • All nucleic 8
      cDNA 8

      Microarray probesets 3
    References
    more
    • Summaries
      All 23
      Gene Ontology 1
      Phenotypes 6
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory