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Gcc2
Gene Detail
Symbol

Name
ID
Gcc2
GRIP and coiled-coil domain containing 2
MGI:1917547
Synonyms
0610043A03Rik, 2210420P05Rik, 2600014C01Rik, mKIAA0336
Feature Type
protein coding gene
Genetic Map
Chromosome 10
29.30 cM, cytoband B3
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr10:58255497-58305599 bp, + strand
From VEGA annotation of GRCm38

  50103 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:45639  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

HCOP human homology predictions: GCC2
Gene Tree: Gcc2

Human
homologs
GCC2, GRIP and coiled-coil domain containing 2
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 9648
neXtProt AC: NX_Q8IWJ2

Human Synonyms: GCC185, RANBP2L4, REN53

Human Chr (Location): 2q12.3; chr2:108449121-108509398 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Gcc2 interacts with 317 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (20 annotations)
Process Golgi ribbon formation, late endosome to Golgi transport, ...
Component cytoplasm, Golgi apparatus, ...
Function identical protein binding, protein binding
External Resources: FuncBase
Expression
cDNA source data(83)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase gcc2    NEW 
Molecular
reagents
All nucleic(84) cDNA(84)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000034161 (Evidence)
Ensembl Gene Model ENSMUSG00000038039 (Evidence)
Entrez Gene 70297 (Evidence)
UniGene 25531
DFCI TC1611882, TC1597729, TC1584215, TC1580346
DoTS DT.531108, DT.91330467, DT.97353646
NIA Mouse Gene Index U011538
Consensus CDS Project CCDS23859.1
International Mouse Phenotyping Consortium Status Gcc2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034161 VEGA Gene Model | MGI Sequence Detail 50103 C57BL/6J ±  kb
transcript OTTMUST00000086576 VEGA | MGI Sequence Detail 6547 Not Applicable 
polypeptide OTTMUSP00000046882 VEGA | MGI Sequence Detail 1680 Not Applicable 

For the selected sequences
All sequences(75) RefSeq(5) UniProt(9)
Polymorphisms
SNPs within 2kb(199 from dbSNP Build 137)    SNPs within 2kb including multiple locations(201)
Protein-related
information
ResourceIDDescription
InterPro IPR000237 GRIP
Protein Ontology PR:000007887 GRIP and coiled-coil domain-containing protein 2
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(33)
Other
accession IDs
MGI:1917423, MGI:1923516, MGI:2143810

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory