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Krt78 Gene Detail
Summary
  • Symbol
    Krt78
  • Name
    keratin 78
  • Synonyms
    2310030B04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917529
    NCBI Gene: 332131
  • Gene Overview
    MyGene.info: KRT78
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:101946001-101954287 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 57.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917529
 protein coding gene Chr15:101946001-101996624 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022394
 protein coding gene Chr15:104079005-104086881 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0022360
 protein coding gene Chr15:100046105-100054116 (-)
C3H/HeJ MGP_C3HHeJ_G0022127
 protein coding gene Chr15:103088478-103098393 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022809
 protein coding gene Chr15:107948628-107956506 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020332
 protein coding gene Chr15:95782542-95790566 (-)
CAST/EiJ MGP_CASTEiJ_G0021653
 protein coding gene Chr15:103947967-103955408 (-)
CBA/J MGP_CBAJ_G0022096
 protein coding gene Chr15:111711671-111720654 (-)
DBA/2J MGP_DBA2J_G0022227
 protein coding gene Chr15:99285904-99294054 (-)
FVB/NJ MGP_FVBNJ_G0022203
 protein coding gene Chr15:98343864-98351611 (-)
LP/J MGP_LPJ_G0022296
 protein coding gene Chr15:104234764-104244224 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022225
 protein coding gene Chr15:115328704-115336452 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022821
 protein coding gene Chr15:103047740-103055977 (-)
PWK/PhJ MGP_PWKPhJ_G0021393
 protein coding gene Chr15:99434308-99442228 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021225
 protein coding gene Chr15:102881138-102889023 (-)
WSB/EiJ MGP_WSBEiJ_G0021703
 protein coding gene Chr15:103672431-103680848 (-)



Homology
more
  • Human Ortholog
    KRT78, keratin 78
  • Vertebrate Orthologs
    7
  • Human Ortholog
    KRT78, keratin 78
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CK-78, K5B, K78, Kb40
  • Links
    NCBI Gene ID: 196374
    neXtProt AC: NX_Q8N1N4
    UniProt: Q8N1N4

  • Chr Location
    12q13.13; chr12:52837804-52848994 (-)  GRCh38.p7
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    25 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    631
  • cDNA Data
    7
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050463 Ensembl Gene Model | MGI Sequence Detail 8287 C57BL/6J ±  kb
transcript ENSMUST00000164932 Ensembl | MGI Sequence Detail 3437 Not Applicable  
polypeptide ENSMUSP00000126197 Ensembl | MGI Sequence Detail 1068 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR039008 Intermediate filament, rod domain
    IPR042180 Intermediate filament, rod domain, coil 1B
    IPR003054 Keratin, type II
    IPR032444 Keratin type II head
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 41
    Diseases 1
    Phenotypes 25
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/30/2020
MGI 6.15 		The Jackson Laboratory