About   Help   FAQ
Chpf2 Gene Detail
Summary
  • Symbol
    Chpf2
  • Name
    chondroitin polymerizing factor 2
  • Synonyms
    2010209O12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917522
    NCBI Gene: 100910
Location & Maps
more
  • Sequence Map
    Chr5:24586741-24594556 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7816 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 11.93 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CHPF2, chondroitin polymerizing factor 2
  • Vertebrate Orthologs
    8
  • Human Ortholog
    CHPF2, chondroitin polymerizing factor 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    chPF-2, ChSy-3, CSGlcAT, CSGLCA-T
  • Links
    NCBI Gene ID: 54480
    neXtProt AC: NX_Q9P2E5

  • Chr Location
    7q36.1; chr7:151232489-151238827 (+)  GRCh38.p2

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    2
  • Gene trapped
    5
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving Chpf2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030540 VEGA Gene Model | MGI Sequence Detail 7816 C57BL/6J ±  kb
transcript OTTMUST00000075599 VEGA | MGI Sequence Detail 5371 Not Applicable  
polypeptide OTTMUSP00000039664 VEGA | MGI Sequence Detail 768 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    54 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR008428 Chondroitin N-acetylgalactosaminyltransferase
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:2141145
References
more
  • Summaries
    All 22
    Diseases 1
    Gene Ontology 1
    Phenotypes 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:161922 Tang T, et al., A mouse knockout library for secreted and transmembrane proteins. Nat Biotechnol. 2010 Jul;28(7):749-55

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/13/2016
MGI 6.05
The Jackson Laboratory