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Poc1a
Gene Detail
 Symbol
Name
ID
Poc1a
POC1 centriolar protein homolog A (Chlamydomonas)
MGI:1917485
Synonyms 2510040D07Rik, Wdr51a
Feature Type protein coding gene
Genetic Map
Chromosome 9
57.46 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:106281061-106349891 bp, + strand
From NCBI annotation of GRCm38

  68831 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:51460  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Poc1a

Human
homologs
Human Homolog POC1A, POC1 centriolar protein A
NCBI Gene ID 25886
neXtProt AC  NX_Q8NBT0
Human Synonyms  PIX2, SOFT, WDR51A
Human Chr (Location)  3p21.2; chr3:52075233-52154704 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human POC1A
Alleles
and
phenotypes
All alleles(83) : Gene trapped(82) Targeted(1)
Incidental mutations (data from APF )
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process cell projection organization
Component cell projection, centriole, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(34)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(35) cDNA(35)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000023345 (Evidence)
Entrez Gene70235 (Evidence)
UniGene23054
DFCITC1581044, TC1595466, TC1664932
DoTSDT.101170439, DT.60117661
NIA Mouse Gene IndexU010971
Consensus CDS ProjectCCDS23474.1
International Mouse Knockout Project StatusPoc1a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 70235 NCBI Gene Model | MGI Sequence Detail 68831 C57BL/6J ±  kb
transcript NM_027354 RefSeq | MGI Sequence Detail 1707 C57BL/6 
polypeptide Q8JZX3 UniProt | EBI | MGI Sequence Detail 405 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(6) UniProt(1)
Polymorphisms SNPs within 2kb(619 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR020472 G-protein beta WD-40 repeat
InterPro IPR001680 WD40 repeat
InterPro IPR019775 WD40 repeat, conserved site
InterPro IPR017986 WD40-repeat-containing domain
InterPro IPR015943 WD40/YVTN repeat-like-containing domain
Protein Ontology PR:000031914 POC1 centriolar protein homolog A
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory