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Poc1a
Gene Detail
Symbol

Name
ID
Poc1a
POC1 centriolar protein homolog A (Chlamydomonas)
MGI:1917485
Synonyms
2510040D07Rik, Wdr51a
Feature Type
protein coding gene
Genetic Map
Chromosome 9
57.46 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:106281061-106350521 bp, + strand
From VEGA annotation of GRCm38

  69461 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:51460  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: POC1A
Gene Tree: Poc1a

Human
homologs
POC1A, POC1 centriolar protein A
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 25886
neXtProt AC: NX_Q8NBT0

Human Synonyms: PIX2, SOFT, WDR51A

Human Chr (Location): 3p21.2; chr3:52075233-52154690 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human POC1A

Mutations,
alleles, and
phenotypes
All mutations/alleles(85) : Endonuclease-mediated(1) Gene trapped(82) Targeted(2)
Incidental mutations (data from APF , CvDC )
Interactions
Poc1a interacts with 48 markers (Mir92-2, Mir96, Mir98, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process cell projection organization
Component cell projection, centriole, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(34)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase poc1a    NEW 
Molecular
reagents
All nucleic(35) cDNA(35)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000049423 (Evidence)
Ensembl Gene Model ENSMUSG00000023345 (Evidence)
Entrez Gene 70235 (Evidence)
UniGene 23054
DFCI TC1581044, TC1595466, TC1664932
DoTS DT.101170439, DT.60117661
NIA Mouse Gene Index U010971
Consensus CDS Project CCDS23474.1
International Mouse Phenotyping Consortium Status Poc1a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000049423 VEGA Gene Model | MGI Sequence Detail 69461 C57BL/6J ±  kb
transcript OTTMUST00000125993 VEGA | MGI Sequence Detail 1695 Not Applicable 
polypeptide OTTMUSP00000068183 VEGA | MGI Sequence Detail 405 Not Applicable 

For the selected sequences
All sequences(39) RefSeq(6) UniProt(1)
Polymorphisms
SNPs within 2kb(624 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR020472 G-protein beta WD-40 repeat
InterPro IPR001680 WD40 repeat
InterPro IPR019775 WD40 repeat, conserved site
InterPro IPR017986 WD40-repeat-containing domain
InterPro IPR015943 WD40/YVTN repeat-like-containing domain
Protein Ontology PR:000031914 POC1 centriolar protein homolog A
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(35)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory