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Plut Gene Detail
Summary
  • Symbol
    Plut
  • Name
    PDX1 associated lncRNA, upregulator of transcription
  • Synonyms
    2210019I11Rik
Location &
Maps
more
  • Sequence Map
    Chr5:147228598-147271521 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 86.82 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    51 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917397
lncRNA gene Chr5:147228596-147271521 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004219
antisense lncRNA gene Chr5:152868221-152914825 (-)
A/J MGP_AJ_G0004197
antisense lncRNA gene Chr5:146396487-146439799 (-)
AKR/J MGP_AKRJ_G0004178
antisense lncRNA gene Chr5:150896857-150941793 (-)
BALB/cJ MGP_BALBcJ_G0004184
antisense lncRNA gene Chr5:147609534-147652458 (-)
C3H/HeJ MGP_C3HHeJ_G0004132
antisense lncRNA gene Chr5:151860384-151905824 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004333
antisense lncRNA gene Chr5:158469039-158516764 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003806
antisense lncRNA gene Chr5:140812710-140856354 (-)
CAST/EiJ MGP_CASTEiJ_G0004094
antisense lncRNA gene Chr5:151416284-151461621 (-)
CBA/J MGP_CBAJ_G0004126
antisense lncRNA gene Chr5:165072299-165122998 (-)
DBA/2J MGP_DBA2J_G0004142
antisense lncRNA gene Chr5:146080647-146123789 (-)
FVB/NJ MGP_FVBNJ_G0004158
antisense lncRNA gene Chr5:145276484-145319965 (-)
LP/J MGP_LPJ_G0004220
antisense lncRNA gene Chr5:153571925-153616918 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004148
antisense lncRNA gene Chr5:167360680-167405278 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004330
antisense lncRNA gene Chr5:150795617-150841262 (-)
PWK/PhJ MGP_PWKPhJ_G0004047
antisense lncRNA gene Chr5:145160293-145206158 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003991
antisense lncRNA gene Chr5:148126306-148169474 (-)
WSB/EiJ MGP_WSBEiJ_G0004130
antisense lncRNA gene Chr5:151598732-151649397 (-)



Homology
more
  • Human Ortholog
    PLUT, PDX1 associated lncRNA, upregulator of transcription
  • Human Ortholog
    PLUT, PDX1 associated lncRNA, upregulator of transcription
    Orthology source: HGNC
  • Synonyms
    HI-LNC71, PDX1-AS1, PLUTO
  • Links
    NCBI Gene ID: 100861550

  • Chr Location
    13q12.2; chr13:27829759-27921404 (-)  GRCh38.p7

  • HCOP
    human homology predictions: PLUT
  • Gene Tree
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 70147 NCBI Gene Model | MGI Sequence Detail 42924 C57BL/6J ±  kb
transcript NR_038157 RefSeq | MGI Sequence Detail 1442 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 14
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:238473 Akerman I, et al., Human Pancreatic beta Cell lncRNAs Control Cell-Specific Regulatory Networks. Cell Metab. 2017 Feb 7;25(2):400-411

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/12/2021
MGI 6.16
The Jackson Laboratory