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Plut Gene Detail
Summary
  • Symbol
    Plut
  • Name
    PDX1 associated lncRNA, upregulator of transcription
  • Synonyms
    2210019I11Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917397
    NCBI Gene: 70147
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:147228598-147271521 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 86.82 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    51 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917397
lncRNA gene Chr5:147228596-147271521 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004219
antisense lncRNA gene Chr5:152868221-152914825 (-)
A/J MGP_AJ_G0004197
antisense lncRNA gene Chr5:146396487-146439799 (-)
AKR/J MGP_AKRJ_G0004178
antisense lncRNA gene Chr5:150896857-150941793 (-)
BALB/cJ MGP_BALBcJ_G0004184
antisense lncRNA gene Chr5:147609534-147652458 (-)
C3H/HeJ MGP_C3HHeJ_G0004132
antisense lncRNA gene Chr5:151860384-151905824 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004333
antisense lncRNA gene Chr5:158469039-158516764 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003806
antisense lncRNA gene Chr5:140812710-140856354 (-)
CAST/EiJ MGP_CASTEiJ_G0004094
antisense lncRNA gene Chr5:151416284-151461621 (-)
CBA/J MGP_CBAJ_G0004126
antisense lncRNA gene Chr5:165072299-165122998 (-)
DBA/2J MGP_DBA2J_G0004142
antisense lncRNA gene Chr5:146080647-146123789 (-)
FVB/NJ MGP_FVBNJ_G0004158
antisense lncRNA gene Chr5:145276484-145319965 (-)
LP/J MGP_LPJ_G0004220
antisense lncRNA gene Chr5:153571925-153616918 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004148
antisense lncRNA gene Chr5:167360680-167405278 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004330
antisense lncRNA gene Chr5:150795617-150841262 (-)
PWK/PhJ MGP_PWKPhJ_G0004047
antisense lncRNA gene Chr5:145160293-145206158 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003991
antisense lncRNA gene Chr5:148126306-148169474 (-)
WSB/EiJ MGP_WSBEiJ_G0004130
antisense lncRNA gene Chr5:151598732-151649397 (-)



Homology
more
  • Human Ortholog
    PLUT, PDX1 associated lncRNA, upregulator of transcription
  • Human Ortholog
    PLUT, PDX1 associated lncRNA, upregulator of transcription
    Orthology source: HGNC
  • Synonyms
    HI-LNC71, PDX1-AS1, PLUTO
  • Links
    NCBI Gene ID: 100861550

  • Chr Location
    13q12.2; chr13:27829759-27921404 (-)  GRCh38.p7

  • HCOP
    human homology predictions: PLUT
  • Gene Tree
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 70147 NCBI Gene Model | MGI Sequence Detail 42924 C57BL/6J ±  kb
transcript NR_038157 RefSeq | MGI Sequence Detail 1442 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 14
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:238473 Akerman I, et al., Human Pancreatic beta Cell lncRNAs Control Cell-Specific Regulatory Networks. Cell Metab. 2017 Feb 7;25(2):400-411

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/05/2019
MGI 6.14
The Jackson Laboratory