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Slc44a4 Gene Detail
Summary
  • Symbol
    Slc44a4
  • Name
    solute carrier family 44, member 4
  • Synonyms
    2210409B01Rik, NG22
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917379
    NCBI Gene: 70129
  • Gene Overview
    MyGene.info: SLC44A4
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:34914466-34930436 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 18.46 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917379
protein coding gene Chr17:34914224-34930436 (.)
129S1/SvImJ MGP_129S1SvImJ_G0023598
protein coding gene Chr17:35037933-35053904 (+)
A/J MGP_AJ_G0023560
protein coding gene Chr17:33888668-33904625 (+)
AKR/J MGP_AKRJ_G0023526
protein coding gene Chr17:34351016-34366962 (+)
BALB/cJ MGP_BALBcJ_G0023565
protein coding gene Chr17:34016468-34032419 (+)
C3H/HeJ MGP_C3HHeJ_G0023325
protein coding gene Chr17:34746842-34762843 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024005
protein coding gene Chr17:36371346-36387305 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021484
protein coding gene Chr17:31653408-31670388 (+)
CAST/EiJ MGP_CASTEiJ_G0022823
protein coding gene Chr17:34742964-34758953 (+)
CBA/J MGP_CBAJ_G0023303
protein coding gene Chr17:37877270-37893219 (+)
DBA/2J MGP_DBA2J_G0023431
protein coding gene Chr17:33203962-33219927 (+)
FVB/NJ MGP_FVBNJ_G0023398
protein coding gene Chr17:33034958-33051532 (+)
LP/J MGP_LPJ_G0023508
protein coding gene Chr17:35366139-35383999 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023421
protein coding gene Chr17:36815929-36831913 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024047
protein coding gene Chr17:34576320-34592284 (+)
PWK/PhJ MGP_PWKPhJ_G0022572
protein coding gene Chr17:32030753-32047376 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022389
protein coding gene Chr17:32580476-32596459 (+)
WSB/EiJ MGP_WSBEiJ_G0022885
protein coding gene Chr17:34690796-34706814 (+)



Homology
more
  • Human Ortholog
    SLC44A4, solute carrier family 44 member 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SLC44A4, solute carrier family 44 member 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C6orf29, CTL4, DFNA72, hTPPT1, NG22, TPPT
  • Links
    NCBI Gene ID: 80736
    neXtProt AC: NX_Q53GD3
    UniProt: Q53GD3

  • Chr Location
    6p21.33; chr6:31863192-31879046 (-)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human SLC44A4 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000007034 Ensembl Gene Model | MGI Sequence Detail 15971 C57BL/6J ±  kb
transcript ENSMUST00000007249 Ensembl | MGI Sequence Detail 2261 Not Applicable  
polypeptide ENSMUSP00000007249 Ensembl | MGI Sequence Detail 707 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 77
    cDNA 76
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 9
  • Earliest
    J:63110 Martin AM, et al., Immunol Today. 2000;21(7):Centerfold
  • Latest
    J:249090 Nabokina SM, et al., Mechanism(S) Involved in the Colon-Specific Expression of the Thiamine Pyrophosphate (Tpp) Transporter. PLoS One. 2016;11(2):e0149255

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory