About   Help   FAQ
Dpf3 Gene Detail
Summary
  • Symbol
    Dpf3
  • Name
    D4, zinc and double PHD fingers, family 3
  • Synonyms
    2810403B03Rik, cer-d4, CERD4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917377
    NCBI Gene: 70127
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr12:83213745-83350895 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      137151 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 38.47 cM, cytoband D3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    DPF3, double PHD fingers 3
  • Vertebrate Orthologs
    8
  • Human Ortholog
    DPF3, double PHD fingers 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BAF45C, CERD4
  • Links
    NCBI Gene ID: 8110
    neXtProt AC: NX_Q92784
    UniProt: Q92784

  • Chr Location
    14q24.2; chr14:72609032-72894116 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
Mice homozygous for a null allele display no detectable phenotype.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033729 VEGA Gene Model | MGI Sequence Detail 137151 C57BL/6J ±  kb
transcript OTTMUST00000084964 VEGA | MGI Sequence Detail 2940 Not Applicable  
polypeptide OTTMUSP00000045849 VEGA | MGI Sequence Detail 314 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1088 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    Genomic 1
    cDNA 14
    Primer pair 3
    Other 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:2145092
References
more
  • Summaries
    All 44
    Developmental Gene Expression 9
    Gene Ontology 5
    Phenotypes 8
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:242983 Shapira SN, et al., EBF2 transcriptionally regulates brown adipogenesis via the histone reader DPF3 and the BAF chromatin remodeling complex. Genes Dev. 2017 Apr 01;31(7):660-673

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/10/2017
MGI 6.10
The Jackson Laboratory