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Cimap1b Gene Detail
Summary
  • Symbol
    Cimap1b
  • Name
    ciliary microtubule associated protein 1B
  • Synonyms
    2010001J22Rik, Odf3b
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917363
    NCBI Gene: 70113
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:89261652-89263790 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 44.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917363
 protein coding gene Chr15:89261652-89263817 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022231
 protein coding gene Chr15:90568686-90570489 (-)
A/J MGP_AJ_G0022190
 protein coding gene Chr15:87105371-87107175 (-)
AKR/J MGP_AKRJ_G0022165
 protein coding gene Chr15:89681785-89683588 (-)
BALB/cJ MGP_BALBcJ_G0022196
 protein coding gene Chr15:87209593-87211397 (-)
C3H/HeJ MGP_C3HHeJ_G0021966
 protein coding gene Chr15:89680187-89681991 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022641
 protein coding gene Chr15:93860309-93862113 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020166
 protein coding gene Chr15:83332348-83334118 (-)
CAST/EiJ MGP_CASTEiJ_G0021488
 protein coding gene Chr15:90456922-90458725 (-)
CBA/J MGP_CBAJ_G0021933
 protein coding gene Chr15:97042930-97044734 (-)
DBA/2J MGP_DBA2J_G0022060
 protein coding gene Chr15:86555700-86557504 (-)
FVB/NJ MGP_FVBNJ_G0022039
 protein coding gene Chr15:85620960-85622763 (-)
LP/J MGP_LPJ_G0022131
 protein coding gene Chr15:90726716-90728519 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022059
 protein coding gene Chr15:101442171-101443974 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022656
 protein coding gene Chr15:89719289-89721093 (-)
PWK/PhJ MGP_PWKPhJ_G0021229
 protein coding gene Chr15:86618638-86620437 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021063
 protein coding gene Chr15:89468043-89469852 (-)
WSB/EiJ MGP_WSBEiJ_G0021537
 protein coding gene Chr15:90207943-90209746 (-)



Homology
more
  • Human Ortholog
    CIMAP1B, ciliary microtubule associated protein 1B
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CIMAP1B, ciliary microtubule associated protein 1B
  • Synonyms
    FAP123, ODF3B, ODF3L3
  • Links
    NCBI Gene ID: 440836
    neXtProt AC: NX_A8MYP8
    UniProt: A8MYP8

  • Chr Location
    22q13.33; chr22:50529710-50532506 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotypes from 1 allele in 1 genetic background
    25 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    3
  • cDNA Data
    11
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000047394 Ensembl Gene Model | MGI Sequence Detail 2139 C57BL/6J ±  kb
    transcript ENSMUST00000238996 Ensembl | MGI Sequence Detail 873 Not Applicable  
    polypeptide ENSMUSP00000159125 Ensembl | MGI Sequence Detail 254 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 13
      cDNA 11
      Primer pair 2

      Microarray probesets 6
    References
    more
    • Summaries
      All 47
      Developmental Gene Expression 1
      Diseases 1
      Gene Ontology 2
      Phenotypes 25
    • Earliest
      J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
    • Latest
      J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory