About   Help   FAQ
Sft2d2 Gene Detail
Summary
  • Symbol
    Sft2d2
  • Name
    SFT2 domain containing 2
  • Synonyms
    2010005O13Rik, cI-45
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917362
    NCBI Gene: 108735
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:165174337-165194438 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 72.51 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    312 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917362
protein coding gene Chr1:165174337-165194443 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016689
protein coding gene Chr1:170648022-170668640 (-)
A/J MGP_AJ_G0016670
protein coding gene Chr1:163687433-163707564 (-)
AKR/J MGP_AKRJ_G0016636
protein coding gene Chr1:168639440-168659540 (-)
BALB/cJ MGP_BALBcJ_G0016631
protein coding gene Chr1:164176281-164196798 (-)
C3H/HeJ MGP_C3HHeJ_G0016455
protein coding gene Chr1:168860102-168884263 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017092
protein coding gene Chr1:176370383-176390487 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014801
protein coding gene Chr1:155601860-155622248 (-)
CAST/EiJ MGP_CASTEiJ_G0016035
protein coding gene Chr1:168488394-168509126 (-)
CBA/J MGP_CBAJ_G0016430
protein coding gene Chr1:182645866-182665954 (-)
DBA/2J MGP_DBA2J_G0016536
protein coding gene Chr1:162576438-162597499 (-)
FVB/NJ MGP_FVBNJ_G0016534
protein coding gene Chr1:161031164-161052801 (-)
LP/J MGP_LPJ_G0016607
protein coding gene Chr1:171719990-171740089 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016559
protein coding gene Chr1:190153498-190173924 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017128
protein coding gene Chr1:168491245-168511332 (-)
PWK/PhJ MGP_PWKPhJ_G0015821
protein coding gene Chr1:161777985-161798794 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015608
protein coding gene Chr1:167358568-167383082 (-)
WSB/EiJ MGP_WSBEiJ_G0016097
protein coding gene Chr1:168651508-168671935 (-)



Homology
more
  • Human Ortholog
    SFT2D2, SFT2 domain containing 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SFT2D2, SFT2 domain containing 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    dJ747L4.C1.2, UNQ512
  • Links
    NCBI Gene ID: 375035
    neXtProt AC: NX_O95562
    UniProt: O95562

  • Chr Location
    1q24.2; chr1:168226017-168242850 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040848 Ensembl Gene Model | MGI Sequence Detail 20102 C57BL/6J ±  kb
transcript ENSMUST00000043338 Ensembl | MGI Sequence Detail 5535 Not Applicable  
polypeptide ENSMUSP00000043537 Ensembl | MGI Sequence Detail 159 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 97
    cDNA 97

    Microarray probesets 9
Other
Accession IDs
less
MGI:1930799, MGI:2138282
References
more
  • Summaries
    All 29
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:66308 Takahashi Y, et al., Identification of cAMP analogue inducible genes in RAW264 macrophages. Biochim Biophys Acta. 2000 Jul 24;1492(2-3):385-94
  • Latest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
03/13/2019
MGI 6.13
The Jackson Laboratory