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Ermard
Gene Detail
 Symbol
Name
ID
Ermard
ER membrane associated RNA degradation
MGI:1917317
Synonyms 2210404J11Rik, 2410011O22Rik
Feature Type protein coding gene
Genetic Map
Chromosome 17
8.95 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr17:15053059-15064223 bp, + strand
From VEGA annotation of GRCm38

  11165 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:19936  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Gene Tree: Ermard

Human
homologs
Human Homolog ERMARD, ER membrane-associated RNA degradation
NCBI Gene ID 55780
neXtProt AC  NX_Q5T6L9
Human Synonyms  C6orf70, dJ266L20.3, PVNH6
Human Chr (Location)  6q27; chr6:169751622-169781584 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human ERMARD
Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF )
Interactions
Ermard interacts with 92 markers (Mir7-1, Mir18, Mir18b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
Expression
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000048322 (Evidence)
Ensembl Gene ModelENSMUSG00000036552 (Evidence)
Entrez Gene381062 (Evidence)
Consensus CDS ProjectCCDS28410.1, CCDS37451.1
International Mouse Knockout Project StatusErmard
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000048322 VEGA Gene Model | MGI Sequence Detail 11165 C57BL/6J ±  kb
transcript OTTMUST00000123952 VEGA | MGI Sequence Detail 1571 Not Applicable 
polypeptide OTTMUSP00000067549 VEGA | MGI Sequence Detail 174 Not Applicable 

For the selected sequences
All sequences(66) RefSeq(41) UniProt(5)
Polymorphisms SNPs within 2kb(23 from dbSNP Build 137)    SNPs within 2kb including multiple locations(27)
Protein-related
information
ResourceIDDescription
InterPro IPR025209 Domain of unknown function DUF4209
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(18)
Other
accession IDs
MGI:1925733, MGI:3035193

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory