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Ankrd60 Gene Detail
Summary
  • Symbol
    Ankrd60
  • Name
    ankyrin repeat domain 60
  • Synonyms
    1700019A24Rik, 1700030G11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917315
    NCBI Gene: 70065
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:173568658-173578273 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 97.04 cM, cytoband H3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917315
protein coding gene Chr2:173568658-173578341 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026958
protein coding gene Chr2:179866471-179876162 (-)
A/J MGP_AJ_G0026925
protein coding gene Chr2:172292246-172301949 (-)
AKR/J MGP_AKRJ_G0026896
protein coding gene Chr2:177484030-177493725 (-)
BALB/cJ MGP_BALBcJ_G0026934
protein coding gene Chr2:172695853-172705517 (-)
C3H/HeJ MGP_C3HHeJ_G0026676
protein coding gene Chr2:177873464-177883196 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027381
protein coding gene Chr2:185025274-185046477 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024751
protein coding gene Chr2:165521872-165531508 (-)
CAST/EiJ MGP_CASTEiJ_G0026134
protein coding gene Chr2:178587379-178600740 (-)
CBA/J MGP_CBAJ_G0026653
protein coding gene Chr2:191949722-191961285 (-)
DBA/2J MGP_DBA2J_G0026791
protein coding gene Chr2:171383405-171393104 (-)
FVB/NJ MGP_FVBNJ_G0026757
protein coding gene Chr2:170018351-170027980 (-)
LP/J MGP_LPJ_G0026892
protein coding gene Chr2:179787219-179796904 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026776
protein coding gene Chr2:194873284-194882912 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027438
protein coding gene Chr2:177504235-177513933 (-)
PWK/PhJ MGP_PWKPhJ_G0025871
protein coding gene Chr2:171193338-171203073 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025671
protein coding gene Chr2:176538010-176550757 (-)
WSB/EiJ MGP_WSBEiJ_G0026207
protein coding gene Chr2:178458416-178468104 (-)



Homology
more
  • Human Ortholog
    ANKRD60, ankyrin repeat domain 60
  • Vertebrate Orthologs
    7
  • Human Ortholog
    ANKRD60, ankyrin repeat domain 60
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bA196N14.3, C20orf86
  • Links
    NCBI Gene ID: 140731
    neXtProt AC: NX_Q9BZ19
    UniProt: Q9BZ19

  • Chr Location
    20q13.32; chr20:58216126-58228653 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 70065 NCBI Gene Model | MGI Sequence Detail 9616 C57BL/6J ±  kb
transcript NM_027303 RefSeq | MGI Sequence Detail 1000 C57BL/6  
polypeptide NP_081579 RefSeq | MGI Sequence Detail 229 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR002110 Ankyrin repeat
    IPR020683 Ankyrin repeat-containing domain
    IPR036770 Ankyrin repeat-containing domain superfamily
    IPR039323 Ankyrin repeat domain-containing protein 60
    IPR000626 Ubiquitin-like domain
    IPR029071 Ubiquitin-like domain superfamily
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 1
Other
Accession IDs
less
MGI:1916675
References
more
  • Summaries
    All 17
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/12/2021
MGI 6.16
The Jackson Laboratory