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Spata3 Gene Detail
Summary
  • Symbol
    Spata3
  • Name
    spermatogenesis associated 3
  • Synonyms
    1700011N12Rik, 1700029H01Rik, 4930424D10Rik, TSARG1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917310
    NCBI Gene: 70060
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:86017841-86029958 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 43.94 cM, cytoband C5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    89 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917310
protein coding gene Chr1:86016816-86029958 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016239
protein coding gene Chr1:87246355-87259498 (+)
A/J MGP_AJ_G0016220
protein coding gene Chr1:84021596-84035731 (+)
AKR/J MGP_AKRJ_G0016181
protein coding gene Chr1:86453254-86466262 (+)
BALB/cJ MGP_BALBcJ_G0016177
protein coding gene Chr1:84137188-84150330 (+)
C3H/HeJ MGP_C3HHeJ_G0016005
protein coding gene Chr1:86706030-86719259 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016633
protein coding gene Chr1:90577766-90590908 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014355
protein coding gene Chr1:78509312-78522341 (+)
CAST/EiJ MGP_CASTEiJ_G0015590
protein coding gene Chr1:85941877-85956585 (+)
CBA/J MGP_CBAJ_G0015981
protein coding gene Chr1:93392524-93405750 (+)
DBA/2J MGP_DBA2J_G0016084
protein coding gene Chr1:83330964-83344098 (+)
FVB/NJ MGP_FVBNJ_G0016083
protein coding gene Chr1:82375310-82388551 (+)
LP/J MGP_LPJ_G0016155
protein coding gene Chr1:88363147-88371228 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016109
protein coding gene Chr1:96679391-96692405 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016676
protein coding gene Chr1:86578959-86592200 (+)
PWK/PhJ MGP_PWKPhJ_G0015377
protein coding gene Chr1:82608706-82622090 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015157
protein coding gene Chr1:85557608-85570673 (+)
WSB/EiJ MGP_WSBEiJ_G0015654
protein coding gene Chr1:86226801-86239944 (+)



Homology
more
  • Human Ortholog
    SPATA3, spermatogenesis associated 3
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SPATA3, spermatogenesis associated 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TSARG1
  • Links
    NCBI Gene ID: 130560
    neXtProt AC: NX_Q8NHX4
    UniProt: Q8NHX4

  • Chr Location
    2q37.1; chr2:230996124-231019939 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Spata3
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 70060 NCBI Gene Model | MGI Sequence Detail 12118 C57BL/6J ±  kb
transcript NM_027300 RefSeq | MGI Sequence Detail 1107 C57BL/6  
polypeptide Q9D9T6 UniProt | EBI | MGI Sequence Detail 193 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 25
    cDNA 25

    Microarray probesets 4
Other
Accession IDs
less
MGI:1916552, MGI:1921026
References
more
  • Summaries
    All 23
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory