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Csrp2bp
Gene Detail
Symbol

Name
ID
Csrp2bp
cysteine and glycine-rich protein 2 binding protein
MGI:1917264
Synonyms
2510008M08Rik, ATAC2, D2Ertd473e, D2Wsu131e
Feature Type
protein coding gene
Genetic Map
Chromosome 2
71.01 cM
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr2:144368983-144407676 bp, + strand
From VEGA annotation of GRCm38

  38694 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10745  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CSRP2BP
Gene Tree: Csrp2bp

Human
homologs
CSRP2BP, CSRP2 binding protein
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 57325
neXtProt AC: NX_Q9H8E8

Human Synonyms: ATAC2, CRP2BP, dJ717M23.1, KAT14, PRO1194

Human Chr (Location): 20p11.23; chr20:18142224-18188387 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(7) Spontaneous(1) Targeted(1)
Genomic Mutations involving Csrp2bp (1)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a null allele exhibit embryonic lethality during organogenesis, decreased size, increased apoptosis, and disrupted cell cycling. Mice heterozygous for one targeted allele exhibit corneal opacity.
 
Mutations Annotated to Human Diseases (1)    Phenotype Images(3)
Interactions
Csrp2bp interacts with 140 markers (Mir1a-1, Mir1a-2, Mir15a, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (7)    Tissues (3)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
RT-PCR 6
cDNA source data(9)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase csrp2bp ; ZFIN pet117    NEW 
Molecular
reagents
All nucleic(12) cDNA(10) Primer pair(2)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000003524 (Evidence)
Ensembl Gene Model ENSMUSG00000027425 (Evidence)
Entrez Gene 228714 (Evidence)
DFCI TC1647939, TC1605028, TC1576215
DoTS DT.101290890, DT.110739554, DT.87041963, DT.492398, DT.110739570, DT.40166662
NIA Mouse Gene Index U002569
Consensus CDS Project CCDS16819.1
International Mouse Phenotyping Consortium Status Csrp2bp
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000003524 VEGA Gene Model | MGI Sequence Detail 38694 C57BL/6J ±  kb
transcript OTTMUST00000007543 VEGA | MGI Sequence Detail 3801 Not Applicable 
polypeptide OTTMUSP00000003639 VEGA | MGI Sequence Detail 779 Not Applicable 

For the selected sequences
All sequences(71) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(380 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR016181 Acyl-CoA N-acyltransferase
InterPro IPR000182 GNAT domain
Protein Ontology PR:000005960 cysteine-rich protein 2-binding protein
References
(Earliest) J:50869 Ko MSH, et al., Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Hum Mol Genet. 1998 Nov;7(12):1967-78
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(38)
Other
accession IDs
MGD-MRK-35817, MGI:107351, MGI:1196394, MGI:2139204

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory