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1700027A07Rik Gene Detail
Summary
  • Symbol
    1700027A07Rik
  • Name
    RIKEN cDNA 1700027A07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917246
    NCBI Gene: 69996
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr15:78911966-78913660 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 37.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917246
lncRNA gene Chr15:78911966-78913660 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003294
antisense lncRNA gene Chr15:79148163-79149857 (-)
A/J MGP_AJ_G0003270
antisense lncRNA gene Chr15:76424079-76425797 (-)
AKR/J MGP_AKRJ_G0003253
antisense lncRNA gene Chr15:78540897-78542593 (-)
BALB/cJ MGP_BALBcJ_G0003259
antisense lncRNA gene Chr15:76393313-76395021 (-)
C3H/HeJ MGP_C3HHeJ_G0003212
antisense lncRNA gene Chr15:78542631-78544336 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003401
antisense lncRNA gene Chr15:82261016-82262710 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002923
antisense lncRNA gene Chr15:72910903-72912560 (-)
CAST/EiJ MGP_CASTEiJ_G0003178
antisense lncRNA gene Chr15:79233100-79234782 (-)
CBA/J MGP_CBAJ_G0003209
antisense lncRNA gene Chr15:84796431-84798134 (-)
DBA/2J MGP_DBA2J_G0003214
antisense lncRNA gene Chr15:75904276-75905979 (-)
FVB/NJ MGP_FVBNJ_G0003233
antisense lncRNA gene Chr15:74922028-74923728 (-)
LP/J MGP_LPJ_G0003287
antisense lncRNA gene Chr15:79343622-79345316 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003222
antisense lncRNA gene Chr15:89970626-89972320 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003403
antisense lncRNA gene Chr15:78559874-78561568 (-)
PWK/PhJ MGP_PWKPhJ_G0003135
antisense lncRNA gene Chr15:75903168-75904891 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003081
antisense lncRNA gene Chr15:78347043-78348727 (-)
WSB/EiJ MGP_WSBEiJ_G0003212
antisense lncRNA gene Chr15:78931167-78932877 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700027A07Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084864 Ensembl Gene Model | MGI Sequence Detail 1695 C57BL/6J ±  kb
transcript ENSMUST00000150472 Ensembl | MGI Sequence Detail 458 Not Applicable  
polypeptide Q3V2K6 UniProt | EBI | MGI Sequence Detail 78 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 25
    Phenotypes 16
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory