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Galk2
Gene Detail
Symbol

Name
ID
Galk2
galactokinase 2
MGI:1917226
Synonyms
2810017M24Rik, Gk2
Feature Type
protein coding gene
Genetic Map
Chromosome 2
61.76 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:125859109-125984299 bp, + strand
From VEGA annotation of GRCm38

  125191 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:13654  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: galactokinase
Gene Tree: Galk2

Human
homologs
Human Homolog GALK2, galactokinase 2
NCBI Gene ID 2585
neXtProt AC  NX_Q01415
Human Synonyms  GK2
Human Chr (Location)  15q21.1-q21.2; chr15:49155759-49367758 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(5) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Galk2 interacts with 132 markers (Mir7-2, Mir17, Mir18, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process carbohydrate phosphorylation, galactose metabolic process, ...
Component cytoplasm
Function ATP binding, galactokinase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Images (14)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(71)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(72) cDNA(71) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000015339 (Evidence)
Ensembl Gene ModelENSMUSG00000027207 (Evidence)
Entrez Gene69976 (Evidence)
UniGene20216
DFCITC1587439, TC1574143, TC1596876
NIA Mouse Gene IndexU002414
EC2.7.1.157
Consensus CDS ProjectCCDS16680.1, CCDS71134.1
International Mouse Knockout Project StatusGalk2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015339 VEGA Gene Model | MGI Sequence Detail 125191 C57BL/6J ±  kb
transcript OTTMUST00000036351 VEGA | MGI Sequence Detail 1928 Not Applicable 
polypeptide OTTMUSP00000016336 VEGA | MGI Sequence Detail 458 Not Applicable 

For the selected sequences
All sequences(82) RefSeq(8) UniProt(19)
Polymorphisms
SNPs within 2kb(939 from dbSNP Build 137)    SNPs within 2kb including multiple locations(941)
Protein-related
information
ResourceIDDescription
InterPro IPR000705 Galactokinase
InterPro IPR019741 Galactokinase, conserved site
InterPro IPR019539 Galactokinase galactose-binding domain
InterPro IPR006203 GHMP kinase, ATP-binding, conserved site
InterPro IPR013750 GHMP kinase, C-terminal domain
InterPro IPR006204 GHMP kinase N-terminal domain
InterPro IPR006206 Mevalonate/galactokinase
InterPro IPR020568 Ribosomal protein S5 domain 2-type fold
InterPro IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Protein Ontology PR:000007814 N-acetylgalactosamine kinase
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(36)
Other
accession IDs
MGI:2138914

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory