About   Help   FAQ
Cdc16 Gene Detail
Summary
  • Symbol
    Cdc16
  • Name
    CDC16 cell division cycle 16
  • Synonyms
    2700071J12Rik, 2810431D22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917207
    NCBI Gene: 69957
  • Gene Overview
    MyGene.info: CDC16
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:13757676-13781938 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 6.38 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    239 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917207
protein coding gene Chr8:13757649-13781938 (.)
129S1/SvImJ MGP_129S1SvImJ_G0033386
protein coding gene Chr8:11120106-11149169 (+)
A/J MGP_AJ_G0033366
protein coding gene Chr8:10711634-10737669 (+)
AKR/J MGP_AKRJ_G0033297
protein coding gene Chr8:10998403-11022549 (+)
BALB/cJ MGP_BALBcJ_G0033367
protein coding gene Chr8:10843208-10867240 (+)
C3H/HeJ MGP_C3HHeJ_G0033080
protein coding gene Chr8:11214520-11245481 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033879
protein coding gene Chr8:11491055-11515205 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030847
protein coding gene Chr8:10208406-10233281 (+)
CAST/EiJ MGP_CASTEiJ_G0032402
protein coding gene Chr8:10985987-11011571 (+)
CBA/J MGP_CBAJ_G0033053
protein coding gene Chr8:11992952-12018578 (+)
DBA/2J MGP_DBA2J_G0033206
protein coding gene Chr8:10657731-10681905 (+)
FVB/NJ MGP_FVBNJ_G0033155
protein coding gene Chr8:10677503-10702206 (+)
LP/J MGP_LPJ_G0033300
protein coding gene Chr8:11047559-11073116 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033189
protein coding gene Chr8:12210319-12234455 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033896
protein coding gene Chr8:11072422-11097816 (+)
PWK/PhJ MGP_PWKPhJ_G0032115
protein coding gene Chr8:10717329-10741545 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031957
protein coding gene Chr8:10956506-10985062 (+)
WSB/EiJ MGP_WSBEiJ_G0032518
protein coding gene Chr8:11096130-11120291 (+)



Homology
more
  • Human Ortholog
    CDC16, cell division cycle 16
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CDC16, cell division cycle 16
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ANAPC6, APC6, CDC16Hs, CUT9
  • Links
    NCBI Gene ID: 8881
    neXtProt AC: NX_Q13042
    UniProt: Q13042

  • Chr Location
    13q34; chr13:114234845-114272675 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 2899
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CDC16
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038416 Ensembl Gene Model | MGI Sequence Detail 24263 C57BL/6J ±  kb
transcript ENSMUST00000043962 Ensembl | MGI Sequence Detail 2301 Not Applicable  
polypeptide ENSMUSP00000047950 Ensembl | MGI Sequence Detail 620 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 146
    cDNA 146

    Microarray probesets 4
Other
Accession IDs
less
MGI:1919860
References
more
  • Summaries
    All 29
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory