About   Help   FAQ
Rcbtb2
Gene Detail
 Symbol
Name
ID
Rcbtb2
regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
MGI:1917200
Synonyms 2610028E02Rik, 2810420M18Rik, Chc1l, Rc/btb2
Feature Type protein coding gene
Genetic Map
Chromosome 14
38.66 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr14:73123037-73207843 bp, + strand
From VEGA annotation of GRCm38

  84807 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:970  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Rcbtb2

Human
homologs
Human Homolog RCBTB2, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
NCBI Gene ID 1102
neXtProt AC  NX_O95199
Human Synonyms  CHC1L, RLG
Human Chr (Location)  13q14.3; chr13:48488963-48533256 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(18) : Gene trapped(18)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rcbtb2 interacts with 241 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component acrosomal vesicle
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(11)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(14) cDNA(14)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000036135 (Evidence)
Ensembl Gene ModelENSMUSG00000022106 (Evidence)
Entrez Gene105670 (Evidence)
DFCITC1575664, TC1600127, TC1610546, TC1626353, TC1689348, TC1690693
DoTSDT.101147344, DT.101238649, DT.101357868, DT.101398744, DT.101398746, DT.55111677, DT.97345201
NIA Mouse Gene IndexU015841
Consensus CDS ProjectCCDS27266.1
International Mouse Knockout Project StatusRcbtb2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036135 VEGA Gene Model | MGI Sequence Detail 84807 C57BL/6J ±  kb
transcript OTTMUST00000092884 VEGA | MGI Sequence Detail 3531 Not Applicable 
polypeptide OTTMUSP00000051429 VEGA | MGI Sequence Detail 551 Not Applicable 

For the selected sequences
All sequences(166) RefSeq(23) UniProt(15)
Polymorphisms SNPs within 2kb(626 from dbSNP Build 137)    SNPs within 2kb including multiple locations(630)
Protein-related
information
ResourceIDDescription
InterPro IPR013069 BTB/POZ
InterPro IPR011333 BTB/POZ fold
InterPro IPR000210 BTB/POZ-like
InterPro IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
InterPro IPR000408 Regulator of chromosome condensation, RCC1
Protein Ontology PR:000030818 RCC1 and BTB domain-containing protein 2
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:187907 Wang J, et al., Mouse RC/BTB2, a member of the RCC1 superfamily, localizes to spermatid acrosomal vesicles. PLoS One. 2012;7(6):e39846
All references(29)
Other
accession IDs
MGI:1919062, MGI:2145647, MGI:2145809

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/09/2014
MGI 5.19
The Jackson Laboratory