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Lrch4 Gene Detail
Summary
  • Symbol
    Lrch4
  • Name
    leucine-rich repeats and calponin homology (CH) domain containing 4
  • Synonyms
    2810008P14Rik, 2900069C24Rik, LRN, LRRN4, SAP25
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917193
    NCBI Gene: 231798
  • Gene Overview
    MyGene.info: LRCH4
Location & Maps
more
  • Sequence Map
    Chr5:137629121-137641099 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      11979 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 76.59 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    LRCH4, leucine rich repeats and calponin homology domain containing 4
  • Vertebrate Orthologs
    8
  • Human Ortholog
    LRCH4, leucine rich repeats and calponin homology domain containing 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LRN, LRRN1, LRRN4, PP14183
  • Links
    NCBI Gene ID: 4034
    neXtProt AC: NX_O75427

  • Chr Location
    7q22.1; chr7:100574011-100586188 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000040073 VEGA Gene Model | MGI Sequence Detail 11979 C57BL/6J ±  kb
transcript OTTMUST00000104088 VEGA | MGI Sequence Detail 3078 Not Applicable  
polypeptide OTTMUSP00000058215 VEGA | MGI Sequence Detail 680 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    56 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 8
Other
Accession IDs
less
MGI:1924227, MGI:2140932
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:6660 Rougeon F, et al., Molecular cloning of a mouse submaxillary gland renin cDNA fragment. Proc Natl Acad Sci U S A. 1981 Oct;78(10):6367-71
  • Latest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory