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Hnrnpa3 Gene Detail
Summary
  • Symbol
    Hnrnpa3
  • Name
    heterogeneous nuclear ribonucleoprotein A3
  • Synonyms
    2410013L13Rik, 2610209F03Rik, 2610510D13Rik, Hnrpa3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917171
    NCBI Gene: 229279
  • Gene Overview
    MyGene.info: HNRNPA3
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:75659261-75669407 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 44.75 cM, cytoband A7.2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    45 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917171
protein coding gene Chr2:75659216-75669407 (.)
129S1/SvImJ MGP_129S1SvImJ_G0025856
protein coding gene Chr2:76022873-76030431 (+)
A/J MGP_AJ_G0025834
protein coding gene Chr2:73046756-73056592 (+)
AKR/J MGP_AKRJ_G0025802
protein coding gene Chr2:75019724-75029787 (+)
BALB/cJ MGP_BALBcJ_G0025828
protein coding gene Chr2:73235238-73245516 (+)
C3H/HeJ MGP_C3HHeJ_G0025588
protein coding gene Chr2:75221757-75228664 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026275
protein coding gene Chr2:78281440-78293703 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023678
protein coding gene Chr2:70462970-70472928 (+)
CAST/EiJ MGP_CASTEiJ_G0025052
protein coding gene Chr2:75541941-75556068 (+)
CBA/J MGP_CBAJ_G0025569
protein coding gene Chr2:81144984-81154759 (+)
DBA/2J MGP_DBA2J_G0025700
protein coding gene Chr2:72643240-72653735 (+)
FVB/NJ MGP_FVBNJ_G0025662
protein coding gene Chr2:72032028-72041800 (+)
LP/J MGP_LPJ_G0025788
protein coding gene Chr2:75871208-75885385 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0026332
protein coding gene Chr2:75140101-75151723 (+)
PWK/PhJ MGP_PWKPhJ_G0024793
protein coding gene Chr2:72601224-72610915 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024601
protein coding gene Chr2:75381674-75384851 (+)
WSB/EiJ MGP_WSBEiJ_G0025120
protein coding gene Chr2:75599425-75611135 (+)



Homology
more
  • Human Ortholog
    HNRNPA3, heterogeneous nuclear ribonucleoprotein A3
  • Vertebrate Orthologs
    2
  • Human Ortholog
    HNRNPA3, heterogeneous nuclear ribonucleoprotein A3
    Orthology source: HGNC
  • Synonyms
    2610510D13Rik, D10S102, FBRNP, HNRPA3
  • Links
    NCBI Gene ID: 220988
    neXtProt AC: NX_P51991
    UniProt: P51991

  • Chr Location
    2q31.2; chr2:177212694-177223959 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000059005 Ensembl Gene Model | MGI Sequence Detail 10147 C57BL/6J ±  kb
transcript ENSMUST00000111964 Ensembl | MGI Sequence Detail 1654 Not Applicable  
polypeptide ENSMUSP00000107595 Ensembl | MGI Sequence Detail 379 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 24
    cDNA 21
    Primer pair 2
    Other 1

    Microarray probesets 14
Other
Accession IDs
less
MGI:2149671, MGI:2149675
References
more
  • Summaries
    All 42
    Developmental Gene Expression 3
    Gene Ontology 5
    Phenotypes 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:227263 Fabre PJ, et al., Nanoscale spatial organization of the HoxD gene cluster in distinct transcriptional states. Proc Natl Acad Sci U S A. 2015 Nov 10;112(45):13964-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory