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Krtcap3 Gene Detail
Summary
  • Symbol
    Krtcap3
  • Name
    keratinocyte associated protein 3
  • Synonyms
    2010001C09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917065
    NCBI Gene: 69815
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:31251691-31253202 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 17.27 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    6 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917065
protein coding gene Chr5:31251670-31253202 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029421
protein coding gene Chr5:29244231-29245742 (+)
A/J MGP_AJ_G0029387
protein coding gene Chr5:28282720-28284231 (+)
AKR/J MGP_AKRJ_G0029337
protein coding gene Chr5:29433229-29434742 (+)
BALB/cJ MGP_BALBcJ_G0029398
protein coding gene Chr5:28797442-28798953 (+)
C3H/HeJ MGP_C3HHeJ_G0029119
protein coding gene Chr5:29454406-29455917 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029851
protein coding gene Chr5:31058479-31059990 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027089
protein coding gene Chr5:25748370-25749884 (+)
CAST/EiJ MGP_CASTEiJ_G0028529
protein coding gene Chr5:28536667-28538180 (+)
CBA/J MGP_CBAJ_G0029087
protein coding gene Chr5:31629177-31630688 (+)
DBA/2J MGP_DBA2J_G0029236
protein coding gene Chr5:28459340-28460851 (+)
FVB/NJ MGP_FVBNJ_G0029194
protein coding gene Chr5:27878439-27879950 (+)
LP/J MGP_LPJ_G0029321
protein coding gene Chr5:29697843-29699354 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029223
protein coding gene Chr5:32493035-32494546 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029885
protein coding gene Chr5:28948853-28950364 (+)
PWK/PhJ MGP_PWKPhJ_G0028254
protein coding gene Chr5:27583368-27584879 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028085
protein coding gene Chr5:28342917-28344428 (+)
WSB/EiJ MGP_WSBEiJ_G0028610
protein coding gene Chr5:29012770-29014281 (+)



Homology
more
  • Human Ortholog
    KRTCAP3, keratinocyte associated protein 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    KRTCAP3, keratinocyte associated protein 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    KCP3
  • Links
    NCBI Gene ID: 200634
    neXtProt AC: NX_Q53RY4
    UniProt: Q53RY4

  • Chr Location
    2p23.3; chr2:27442366-27446481 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    22 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029149 Ensembl Gene Model | MGI Sequence Detail 1512 C57BL/6J ±  kb
transcript ENSMUST00000201937 Ensembl | MGI Sequence Detail 889 Not Applicable  
polypeptide ENSMUSP00000144464 Ensembl | MGI Sequence Detail 240 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 4
Other
Accession IDs
less
MGI:2141187
References
more
  • Summaries
    All 42
    Diseases 1
    Gene Ontology 1
    Phenotypes 22
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory