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1810026J23Rik
Gene Detail
Symbol

Name
ID
1810026J23Rik
RIKEN cDNA 1810026J23 gene
MGI:1917023
Feature Type
protein coding gene
Genetic Map
Chromosome 9
7.84 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:21592722-21595970 bp, + strand
From VEGA annotation of GRCm38

  3249 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:34702  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: C19orf52
Gene Tree: 1810026J23Rik

Human
homologs
C19orf52, chromosome 19 open reading frame 52
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 90580
neXtProt AC: NX_Q9BSF4

Human Chr (Location): 19p13.2; chr19:10928748-10930241 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(2) Targeted(1)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
1810026J23Rik interacts with 291 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(9)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: ZFIN zgc:110046    NEW 
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000045908 (Evidence)
Ensembl Gene Model ENSMUSG00000048429 (Evidence)
Entrez Gene 69773 (Evidence)
DFCI TC1574776
DoTS DT.97334021, DT.101735211
NIA Mouse Gene Index U010148
Consensus CDS Project CCDS22908.1
International Mouse Phenotyping Consortium Status 1810026J23Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000045908 VEGA Gene Model | MGI Sequence Detail 3249 C57BL/6J ±  kb
transcript OTTMUST00000119935 VEGA | MGI Sequence Detail 3170 Not Applicable 
polypeptide OTTMUSP00000066542 VEGA | MGI Sequence Detail 266 Not Applicable 

For the selected sequences
All sequences(28) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(7 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019322 Protein of unknown function DUF2366
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(26)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory